Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0171 ATGGCAAATCTTGTTCCTGGAGTGCTTCTGAAGTTGATGCAGCACATGAACACAGATGTGAAAGTTGGTGGTGAGCACAGGTCATGTCTGTTGCAAGTTGTGAGCATTGTTCCAGCACTTGCAGCAGGTGGAGAACTGTTCCCAAGCCAAGGCTTCTATCTCAAGGTTTCTGACTCCTCTCATGCCACCTATGTCTCTCTCCCTGATGAACATGTTGATCTCATCCTCAGTGACAAGATTCAGCTTGGTCAGTTTGTTTTTGTTGATAGGTTGGAGGCTGCTTCACCTGTTCCTCTTCTCCATGGTGTTAGGCCTGTTCCTGGGAGACACCCTTGTATTGGTACCCCTGAGGACATTGTTGCAACAAATTCACTTGGCTTCCTTAGTAATAATGCTAATAAAAACATGGAGATTAGGGACAAGGAGAAGAAGGAGAAAGTAAGATTGAATGGTGAAGTGCAAGCAGGCAAGAAATTGGTGGCTCTTGCTAGATGTAAATCTCAGGCTCAGACAACAAAACCAGCAGCACTAGATGTTATTGATGTGAAGAAGGTTCAATTGGCAAGGTTGAAGTCATTGAATTTAAGGTCTATTCCTTCTTCACCAACTAGTTGCTATTCATTGCCTACTTCTTTTGAGAAATTTGCCATTGGAGTCAAACAGCATGCAAATAACAAGGGAGCGGTGGAGCCAGGAAAAGGTGCTCGCGGGTCTAGTCCTACCACAAAGAAAATTGCAGTAGGAAATCCAATCAGAAATTGGGTTCATGGCATTGAGTTGGGAGCTAAGGCTCTGCGTAAGAGCTGGGAAGGGAGTATGGAGGTTAAGCATCCAGAGGGATCCAAATTGAAAGTGGCCAAGTGTGATCCTAAGCCTGAACTATGCGTCTCGACTCCTAGGAGAAGCACTTCAAGTGAAAAGATTTCGTCTAAAGAGCAGAGCAAGATACAAGCACCAACGAAGTCCATTAAGGAGGAACACAAGATTCAAACATCTACAAAGAAAGTTAGTGCTAATGGAACTATAGAGGAACATGAAAAGTCAAGTAAGCGAAGAAATCCTAGTGGAAAGAAACCATCAGAAGGTTCTAACACCGGCCTTATTGGAAACTTGGTCAAAGTTTCTCCAAATAGTAGAAAGGTGACAGATGTCAGCGTTCAATGGTCTTCACTCCCATCATCTATTGCAAAGCTTGGGAAGGAAGTAATGAAGCACAGAGATGCAGCCCAATTGGCAGCAACTGAAGCTGTGCAAGAGGCTGCCACTGCAGAGAGTTTACTGCAATGTCTAAGGGTATATGCGGAGCTAAATAGTTCTGCTAACAAATACAACCCACAACCTACAGTAGAGCAGTTTTTAACTCTTCACACTAGCCTGAATAGTGTCCGAACAATTTCTGAATCCCTATTTAAACTCAACCCAGATGGTTCATCTCCAGATCATGAAATAAGCACAATGGAAGAAGCACTAGCAATCAAATCAGACAGAGAAAAGCTTGCAGCTTCCTGGGTCCAGGCAGCTTTAGCCACCAACCTGTCATCCTTTTCTGTTTTTACACGTGAACCTCAATCATCGAAGCTTCCAATTTCAAGTGCTTCACAAAATCATAAGAACATCCTGGGAAGTAAACCAATCTTAGTACTAGAAAATTCAAGGCAAGATGCTTCATCAAAATCTCAAGGAAAACCCCGGCAGAAGGCTAATTCGAAGCATGCTTTACAAGGAACTCCACGCAAAGTAGGTGATGGGTTAACAAATGGGAACAAGCAGGTAGTGCAGCCTCTCCCACTGTGGGTTGGAGGAAACAGCCTTGGCGAGGTAGTTAGTTTGGCTGGCATGCTGCAATTGCAGTCGCGAGACTGGTTTTTGGGATTTGTTGAGAGATTCTTAAACACTGATGAGGACACTACTAGCATATCAAGTAATGGACAAGTAGTAGATATGCTCTCCCAACTGAAAAGTGTAAATGATTGGTTAGATGAGATATCAGGCAAGGATGAAGGAGAATCACAGCAGATACCAGCAGAGACAATTGACCAGTTAAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAGTCTGCTGCCGCTGCACTCGGTGGTGGATCACAATCTTCACCTCAGATCCAAACAACAGAGATTAAAGCCAAAAGCTGTTGCTTTTCCATTCTTCTTGATGTTTTCTTTGAAGAGAGATTCCAAGGTTCTACTTGCGCTAAAACTCTCTGTTTCCCTAGATGCATGGTTCTGCAAGAGCCAAAACTAGTTGTTAAAGTTAAATCCTCAGAGACAACAGAATGCAGTGTTATGTTCAATACCAACTCGCGTAGAGATTTTCTTGGTTTAACCTTAGGAATCTCAGGCATGTTCATTGGTCCATTGGTTGCAAAAGCTGCTGGTTTGCCCCCAGAGGATAAACCAAAACTCTGTGATGACATTTGTGAGAAAGAGCTTGAAAATGTGCCTATGGTAACGACCGAATCAGGTCTGCAATACAAGGACATTAAGGTTGGACAGGGACCTAGTCCACCACCTGGATATCAGGTAGCTGCTAACTACGTCGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGGTTTACATTTTTCGCGTTGGTTCTGATCAGGTGATAAAGGGACTGGATGAAGGTATGCTGAGCATGAAAGTAGGAGGAAAACGTAGACTGTATATACCCGGACCATTGGCTTTCCCAAAGGGCCTTACTTCAGCTCCAGGGAGACCAAGGGTGGCTGCAAGCAGTCCAGTCATATTTGATGTTAGTTTGGAATATGTTCCTGGACTTGAACTTGAGGATGAGGAATAA 2844 0.4346 MANLVPGVLLKLMQHMNTDVKVGGEHRSCLLQVVSIVPALAAGGELFPSQGFYLKVSDSSHATYVSLPDEHVDLILSDKIQLGQFVFVDRLEAASPVPLLHGVRPVPGRHPCIGTPEDIVATNSLGFLSNNANKNMEIRDKEKKEKVRLNGEVQAGKKLVALARCKSQAQTTKPAALDVIDVKKVQLARLKSLNLRSIPSSPTSCYSLPTSFEKFAIGVKQHANNKGAVEPGKGARGSSPTTKKIAVGNPIRNWVHGIELGAKALRKSWEGSMEVKHPEGSKLKVAKCDPKPELCVSTPRRSTSSEKISSKEQSKIQAPTKSIKEEHKIQTSTKKVSANGTIEEHEKSSKRRNPSGKKPSEGSNTGLIGNLVKVSPNSRKVTDVSVQWSSLPSSIAKLGKEVMKHRDAAQLAATEAVQEAATAESLLQCLRVYAELNSSANKYNPQPTVEQFLTLHTSLNSVRTISESLFKLNPDGSSPDHEISTMEEALAIKSDREKLAASWVQAALATNLSSFSVFTREPQSSKLPISSASQNHKNILGSKPILVLENSRQDASSKSQGKPRQKANSKHALQGTPRKVGDGLTNGNKQVVQPLPLWVGGNSLGEVVSLAGMLQLQSRDWFLGFVERFLNTDEDTTSISSNGQVVDMLSQLKSVNDWLDEISGKDEGESQQIPAETIDQLRKKIYEYLLTHVESAAAALGGGSQSSPQIQTTEIKAKSCCFSILLDVFFEERFQGSTCAKTLCFPRCMVLQEPKLVVKVKSSETTECSVMFNTNSRRDFLGLTLGISGMFIGPLVAKAAGLPPEDKPKLCDDICEKELENVPMVTTESGLQYKDIKVGQGPSPPPGYQVAANYVAMVPSGQIFDSSLEKGQVYIFRVGSDQVIKGLDEGMLSMKVGGKRRLYIPGPLAFPKGLTSAPGRPRVAASSPVIFDVSLEYVPGLELEDEE 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0171 947 MobiDBLite consensus disorder prediction 318 332 - -
Lal2g0171 947 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 844 935 IPR001179 GO:0003755
Lal2g0171 947 MobiDBLite consensus disorder prediction 292 373 - -
Lal2g0171 947 MobiDBLite consensus disorder prediction 297 317 - -
Lal2g0171 947 Pfam Plant protein of unknown function (DUF936) 4 700 IPR010341 -
Lal2g0171 947 Gene3D - 809 938 IPR046357 GO:0003755
Lal2g0171 947 MobiDBLite consensus disorder prediction 550 572 - -
Lal2g0171 947 PANTHER DUF936 FAMILY PROTEIN 1 718 - -
Lal2g0171 947 MobiDBLite consensus disorder prediction 225 245 - -
Lal2g0171 947 SUPERFAMILY FKBP-like 814 935 - -
Lal2g0171 947 PANTHER EXPRESSED PROTEIN 1 718 IPR010341 -
Lal2g0171 947 MobiDBLite consensus disorder prediction 550 586 - -
Lal2g0171 947 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 847 939 IPR001179 GO:0003755
Lal2g0171 947 Coils Coil 943 947 - -
Lal2g0171 947 MobiDBLite consensus disorder prediction 358 373 - -
Lal2g0171 947 MobiDBLite consensus disorder prediction 339 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0171 Lal-Chr2 1016416 1032765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0171 828 935 Calmodulin-binding Proteins AT3G25230 35.780 2.42e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0361 25 2442894 2448074 Lal2g0171 2 1016416 1032765 PCT
Lal10g1073 10 17700153 17704574 Lal2g0171 2 1016416 1032765 PCT
Lal8g0305 8 2046777 2051005 Lal2g0171 2 1016416 1032765 PCT
Lal2g0171 2 1016416 1032765 Lal25g0361 25 2442894 2448074 PCT
Lal2g0171 2 1016416 1032765 Lal10g1073 10 17700153 17704574 PCT
Lal2g0171 2 1016416 1032765 Lal8g0305 8 2046777 2051005 PCT