Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0162 ATGTGGAAGAGGGTGGATTTTCAAGAAGAGGCAGCTCAATTGCTGAACTCAGATCTGAGGGAACTGAGTGTAGCTGCTAATAAACTCGCCCAACATGCCATCCAACTCGGTGGCAAAGGCTTTGGAGTCTCTTTCTTTGGCTTGTTTGCAGCCATTGCTGCCATTTACTTGTTGATTCTGGATCGTACAAATTGGAAGACCAACATTCTTACATCACTGCTCATTCCATACATTTTCTTCAGCTTGCCTTCATTTGTTTTTGGCGTCTTCAGAGGAGAGATTGGAAAATGGATTGCTGTTGTTGCTGTTGTGTTACGGCTTTTCTTTCCAAGACACTTCCCTGATTGGCTGGAATTGCCTGGTGCTTTGATTCTTCTTATCGGCGTAGCTCCGAGTCTATTGGCAATCACTTTCAGAGACGACATTGTTGGCGTGGCGGTATGTCTTATAATTGCATGTTATTTGCTGCAAGAACACATTCGGGCAGCTGGTGGTTTCAGAAACTCTTTCACTAAAGCCAATGGCTTATCAAATACCATTGGCATTGTCCTTCTGTTAGTTTATCCCATCTGGGCACTGCTGACCATTATCTTTTAG 597 0.4389 MWKRVDFQEEAAQLLNSDLRELSVAANKLAQHAIQLGGKGFGVSFFGLFAAIAAIYLLILDRTNWKTNILTSLLIPYIFFSLPSFVFGVFRGEIGKWIAVVAVVLRLFFPRHFPDWLELPGALILLIGVAPSLLAITFRDDIVGVAVCLIIACYLLQEHIRAAGGFRNSFTKANGLSNTIGIVLLLVYPIWALLTIIF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0162 198 Pfam Cold acclimation protein WCOR413 8 185 IPR008892 GO:0016021
Lal2g0162 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 2 195 IPR008892 GO:0016021
Lal2g0162 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 2 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0162 Lal-Chr2 972774 975036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0162 - - gmx:100811430 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0162 2 972774 975036 Lal2g0162 2 972774 975036 ECH
Lal1g0261 1 1541080 1544421 Lal2g0162 2 972774 975036 LSH