Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0155 ATGATTCCCCTAAACTCCTCAAATCCTTGTCTTTCCAATACCCATTTCCTCAAAGTTCCTATATTTGACCCTTTCTTCAAATTCAAGACATTTTCATTCAATACCCATATCCCTTCAAACGGACATCATGCTCTCTCATTCAGGATCAACTCTAAGCTGAAAAGCTCTCAAGATATCCAAAAAAACAAGGGCAACAATGGAGTGTCTCAGAAGATTATCTTATCAGAAGTGTCCCCACCTCCACTTACAGAGGTGGATGGTGATATCAATGGTGGCACTGGGAATGAGAATGAGAATGTTCCATTAAAGTCAAAGAATAAGGGAAGTGTTTCTGGGTTGGCCAGGATGTTAAGTAAAAGGACACTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAAATGTTCACCATTGCTGCTTTAATGGCTTTGGGAACTTTTATTGATCAAGGTGAGGCCCCTGACCATTATTTCCAGCAATACCCTGAAGATCGTCCCGTATTAGGATTTTTTACTTGGAGATGGGTACTAGCCCTTGGTTTTGATCACATGTATTCATCTCCTGTATTTCTTGGGATGTTGGCTCTCCTTGGTGCATCCCTTATGGCCTGCACTTACACAACACAAATCCCTCTAGTCAAGGTTTCAAGAAGGTTTGGTTGTCAGTTTTCTGCATTCATTATGTCTGCTTTGGGAAATGTCTTGATCACTAAAGGCCTAATTTGTTTCAATAGATGGTCATTTTTGCATTCTGCGGAGGCTATACGTAAACAGGAATTCTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGCACTATATTAATGGGAGCTGGATATGAGGTGTTCTTGAAAGGACCTTGTCTATATGCTTTTCAAGGGCTTGCTGGTCGGCTCGCCCCTATTGGAGTCCATATAGCACTGCTGCTGATAATGGCTGGAGGAACTCTTAGTGCTGTTGGGAGCTTCAAAGGTTCAGTCACTGTGCCCCAAGGACTGAATTTTGTTGCAGGAGATGTCCTCAGTCCTACTGGCTTTCTCTCCTCTCCTACTGAGGATTTTAATACAGAGGTTCATGTCAACAGATTCTACATGGATTATTATGATAGTGGAGAGGTATCGCAGTTTCACACTGATCTTTCCCTCTTAGACATCGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTAAGATATGGTAGTATCACTATATACCAGACAGATTGGAGCATTTCGGCGCTGCAAATTCTTAAAAACAATGAAGGGCCTTATAATTTGGCTATGGCGCCTCTGCAGATAAATGGAGATAAGAAACTTTATGGTACTTTTGTACCCGTTGGAGATATTAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCTCGTGATCTGCAGTCAATTGTCATTTATGATACGGAAGGGAAATTTGCAGGAGTTAGGCGACCTAATTCAAAGCTCCCGATCAATATTAATGGCATAGAAATAGTCATTGTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGACTGATCCAGGTGTGCCAATAGTATATGCTGGATTTGGTGCTCTGATGCTCACAACCTGCATCAGCTATTTATCTCATTCACAGATATGGGCCTTACAAGATGGGACAACAGTGATCATTGGAGGGAAGACTAATAGAGCAAAGATGGAGTTTCCAGAGGAGATGAACCACTTGCTTGATAAGGTTCCTGAAATAATTCAGCCATCTCTATCTCAGCAAGCTGACTGCATTAGTGGCTAG 1782 0.4164 MIPLNSSNPCLSNTHFLKVPIFDPFFKFKTFSFNTHIPSNGHHALSFRINSKLKSSQDIQKNKGNNGVSQKIILSEVSPPPLTEVDGDINGGTGNENENVPLKSKNKGSVSGLARMLSKRTLQILSNLPLAIGEMFTIAALMALGTFIDQGEAPDHYFQQYPEDRPVLGFFTWRWVLALGFDHMYSSPVFLGMLALLGASLMACTYTTQIPLVKVSRRFGCQFSAFIMSALGNVLITKGLICFNRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPCLYAFQGLAGRLAPIGVHIALLLIMAGGTLSAVGSFKGSVTVPQGLNFVAGDVLSPTGFLSSPTEDFNTEVHVNRFYMDYYDSGEVSQFHTDLSLLDIDGKEVMRKTISVNDPLRYGSITIYQTDWSISALQILKNNEGPYNLAMAPLQINGDKKLYGTFVPVGDINSPDVKGISMLARDLQSIVIYDTEGKFAGVRRPNSKLPININGIEIVIVDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHSQIWALQDGTTVIIGGKTNRAKMEFPEEMNHLLDKVPEIIQPSLSQQADCISG 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0155 593 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 118 574 IPR023494 -
Lal2g0155 593 Pfam ResB-like family 457 569 IPR007816 -
Lal2g0155 593 Pfam ResB-like family 130 419 IPR007816 -
Lal2g0155 593 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 82 220 IPR023494 -
Lal2g0155 593 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 244 584 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0155 Lal-Chr2 931138 950348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0155 45 585 Miscellaneous Gene Families AT1G49380 67.343 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0155 K07399 - gmx:100807003 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0155 2 931138 950348 Lal2g0155 2 931138 950348 ECH
Lal1g0245 1 1481199 1487590 Lal2g0155 2 931138 950348 LSH