Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0245 ATGACTCCCTTAAATTCCTCAAATCCATGTCTTCCCAAAACCCACTTCCTCAAAGTCCCAACCTTTGACCCTTTCTTCAAATTCAAATCATTCTCATTCAATACACATATTCCTCCAAACAGAGCTCATGCTCTTTCATTCACCATCAACTCTAAACTGAAAAGCTCTCAAGATATCCAAAACAACAAGGGGAAGAAAGGAGTGTTTCAGAAGATTGTCTTATCAGAAGTGTCCCCTCCTCCACTTACAGAGAATAATGATGATATCAATGGTGGCAGTGGGAATGGAAATGAGAATGTTCCAGTTAAGTCAAGGAATAAGGGAGGTGTTTCTGGGTTAGCCAAGATGTTAAGTAAAAGGGCATTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAAATGTTCACAATTGCTGCTTTGATGGCTTTGGGAACTTTTATTGACCAAGGTGAGCCCCCGGACCATTATTTCCAGCAATACCCTGAAGATCATCCCATATTAGGATTTTTTACTTGGAGATGGGTTCTAGCCCTTGGTTTTGATCACATGTATTCATCTCCTGTATTTCTTGGAATGTTGGTTCTCCTTGGTGCATCGCTCATGGCCTGCACTTACACAACGCAGATCCCTCTAGTCAAGGTTTCAAGAAGATGGTCATTTTTGCACTCTGCGGAGGCTATACGTAAACAAGAATTTTCAGAATCGTTGCCAAGAGCTTCAATCCATGATGTTGGTACTATATTGATGGGATCTGGATATGAGATATTCTTGAAAGGACCATGTTTATATGCTTTTAAAGGGCTCGCTGGTCGTCTGGCCCCTATTGGAGTCCATATAGCACTGCTGCTGATAATGGCTGGAGGAACCCTTAGTGCTCTTGGGAGCTTCAAAGGTTCAGTCACTGTGCCCCAAGGGCTAAATTTTGTTGCAGGAGATGTTCTTGGTCCTACTGGTTTTCTCTCCTCTCCTAATGACGATTTTAATACAGAGATTCATGTCAACAAATTTTACATGGATTATTATGATAGTGGAGAGGTTTCACAGTTCCACACTGATCTTTCCCTCTTTAACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTGAGATATGGTGGTATCACAATATACCAGACAGATTGGAGTATTTCGGCGCTGCAAATTCTTAAGAACAATGAAGGACCTTATAATTTGGCTATGGCACCTCTACAGATAAATGGAGATAAGAAACTTTATGGTACTTTTATGCCCGTTGGAGATGTTAACTCTTCTGATGTTAAGGGAATGTGTATCTCATTCTTTTTACTCTCTTCCGTGTTGAATTTTAGATCTATGCTTGCTCGTGATCTGCAGTCAATTGTTATTTATGACGCGGAAGGGAAATTCGCAGGAGTTAGGCGACCTAATTCAAAGCTCCCGATCAATATTAATGGCACAGAAATTGTCATTGTTGATGCAATAGGGAGTAGCGGCTTGGACTTGAAGACTGATCCAGGTGTACCAATTGTATATGCTGGGTTTGGTGCTCTAATGCTCACAACCTGCATCAGCTATTTATCCCATTCACAGGTATGGGCCTTGCAAGATGGGACAGCAGTGGTTATTGGAGGGAAGAGTAATAGAGCAAAGATGGAGTTTCCAGAGGAGATGAACCGCTTGCTTGACAAGGTTCCCGAAATAGTTCAAACATCTCGATCTGAACAAGCTGACGGCATTAGAGGCTAG 1743 0.4159 MTPLNSSNPCLPKTHFLKVPTFDPFFKFKSFSFNTHIPPNRAHALSFTINSKLKSSQDIQNNKGKKGVFQKIVLSEVSPPPLTENNDDINGGSGNGNENVPVKSRNKGGVSGLAKMLSKRALQILSNLPLAIGEMFTIAALMALGTFIDQGEPPDHYFQQYPEDHPILGFFTWRWVLALGFDHMYSSPVFLGMLVLLGASLMACTYTTQIPLVKVSRRWSFLHSAEAIRKQEFSESLPRASIHDVGTILMGSGYEIFLKGPCLYAFKGLAGRLAPIGVHIALLLIMAGGTLSALGSFKGSVTVPQGLNFVAGDVLGPTGFLSSPNDDFNTEIHVNKFYMDYYDSGEVSQFHTDLSLFNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKNNEGPYNLAMAPLQINGDKKLYGTFMPVGDVNSSDVKGMCISFFLLSSVLNFRSMLARDLQSIVIYDAEGKFAGVRRPNSKLPININGTEIVIVDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHSQVWALQDGTAVVIGGKSNRAKMEFPEEMNRLLDKVPEIVQTSRSEQADGIRG 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0245 580 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 118 561 IPR023494 -
Lal1g0245 580 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 80 571 IPR023494 -
Lal1g0245 580 MobiDBLite consensus disorder prediction 78 104 - -
Lal1g0245 580 MobiDBLite consensus disorder prediction 79 104 - -
Lal1g0245 580 Pfam ResB-like family 454 556 IPR007816 -
Lal1g0245 580 Pfam ResB-like family 130 394 IPR007816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0245 Lal-Chr1 1481199 1487590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0245 41 572 Miscellaneous Gene Families AT1G49380 67.730 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0245 K07399 - gmx:100807003 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0245 1 1481199 1487590 Lal1g0245 1 1481199 1487590 ECH
Lal1g0245 1 1481199 1487590 Lal2g0155 2 931138 950348 LSH