Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0148 ATGAGCCACTCAAGTTTACAAATCAACGCGGAAGAAGATGGAGAAGGAAAGTGGCTAGTGAAGTGTTCTTATGTTACAAAGCGGGTGGGAAAGACATCTTTGATGAATCAATATGTGAATAAGAAGTTTAGCAATCAGTACAAGGCAACCATCGGAGCTGATTTTTTGACCAAAGAAGTGCAATTTGAAGATAGGCTTTTCACCTTGCAGATTTGGGATACAGCTGGTCAGGAAAGATTCCAAAGCCTAGGAGTTGCTTTCTATCGTGGTGCTGATTGTTGTGTTCTTGTATACGATGTTAATTCACTGAAGTCATTTGAAAACCTTAATAACTGGAGGGAGGAATTTCTGATTCAGGCAAGTCCTTCTGATCCAGAGAATTTCCCTTTTGTTGTTATTGGAAACAAGATAGATATTGATGGTGGGAACAGTCGAGTGGTTTCAGAAAAGAAGGCCCGAGCTTGGTGTGCATCAAGGGGAAATATCCCATATTTTGAGACGTCTGCCAAGGAAGGTGTTAATGTTGAAGAAGCGTTCCAATGCATAGCAAAAAATGCCCTTAAAAGTGGGGAAGAGGAAGAGTTATACCTGCCAGACACAATTGATGTTGGAAGCAGCAGTCAGCAACGTGCAACTGGATGTGAGTGCTGA 651 0.4178 MSHSSLQINAEEDGEGKWLVKCSYVTKRVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSLKSFENLNNWREEFLIQASPSDPENFPFVVIGNKIDIDGGNSRVVSEKKARAWCASRGNIPYFETSAKEGVNVEEAFQCIAKNALKSGEEEELYLPDTIDVGSSSQQRATGCEC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0148 216 Gene3D - 26 198 IPR027417 -
Lal2g0148 216 PRINTS Transforming protein P21 ras signature 19 40 - -
Lal2g0148 216 PRINTS Transforming protein P21 ras signature 42 58 - -
Lal2g0148 216 PRINTS Transforming protein P21 ras signature 60 82 - -
Lal2g0148 216 PRINTS Transforming protein P21 ras signature 126 139 - -
Lal2g0148 216 PRINTS Transforming protein P21 ras signature 164 186 - -
Lal2g0148 216 SMART rab_sub_5 29 189 - -
Lal2g0148 216 SMART ras_sub_4 29 189 - -
Lal2g0148 216 ProSiteProfiles small GTPase Rab1 family profile. 11 216 - -
Lal2g0148 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 191 IPR027417 -
Lal2g0148 216 CDD Rab7 29 192 - -
Lal2g0148 216 Pfam Ras family 28 187 IPR001806 GO:0003924|GO:0005525
Lal2g0148 216 TIGRFAM small_GTP: small GTP-binding protein domain 28 182 IPR005225 GO:0005525
Lal2g0148 216 PANTHER RAB FAMILY 27 216 - -
Lal2g0148 216 ProSiteProfiles small GTPase Rho family profile. 10 190 - -
Lal2g0148 216 ProSiteProfiles small GTPase Ras family profile. 14 216 IPR001806 GO:0003924|GO:0005525
Lal2g0148 216 SMART ran_sub_2 29 211 - -
Lal2g0148 216 PANTHER BNAA01G26470D PROTEIN 27 216 - -
Lal2g0148 216 SMART rho_sub_3 29 189 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0148 Lal-Chr2 890634 895856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0148 K07897 - gmx:100305642 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0148 2 890634 895856 Lal2g0148 2 890634 895856 ECH
Lal1g0233 1 1378489 1381735 Lal2g0148 2 890634 895856 LSH