Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0147 ATGGCTCAGCCACTCGTGAAGAAAGACGATGACCATGACGATGAAGATGAGTATTCCCCATTTCTGGGAATTGAAAAGGGGGGTGTTCTTCAGGAGGCCAGGGTTTTTAATGACCCACAACTTGATGCCAGGAGATGTTCACAGGTTATCACAAAACTTTTGTACCTTCTGAATCAGGGAGAGTCATTTTCGAAGGTCGAAGCCACAGAAGTGTTCTTTTCGGTGACTAAACTCTTCCAGTCTCGAGATCTTGGGTTAAGAAGAATGGTCTACTTGATTATTAAGGAACTCTCCCCCTCGGCCGATGAGGTTATTATCGTTACAAGCTCTCTCATGAAGGACATGAACAGTAAGACTGATATGTATAGGGCAAATGCCATTCGTGTGCTCTGTCGTATCACGGATGGAACCCTCCTTACCCAAATTGAACGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTTGCAAGTGCAGCCCTAGTGAGTGGCATTCATCTTCTCCAGACAAATGCTGAGATTGTAAAAAGGTGGAGTAATGAGGTCCAGGAAGCTGTTCAGTCAAGAGCAGCTCTTGTACAATTTCATGCCCTGGCTCTGCTACATCAGATACGGCAAAATGATCGATTAGCTGTTAGCAAGTTGGTTACCAGCTTGACAAGGGGAACCATTCGCTCACCTTTGGCCCAATGCCTTCTGATCCGTTATACAAGTCAGGTCATTCGTGAGTCAGGGAATAATAATACACAATCCGGGGACCGCCCCTTTTATGATTATCTTGAGAGTTGCCTTCGGCACAAGTCAGAGATGGTGATTTTTGAAGCTGCCAAGGCAATTACAGAGCTCAACGGCGTAACGAGCCGGGAATTAACTCCAGCTATTACTGTTCTTCAGCTTTTTTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGTACCTTGAACAAGGTGGCAATGACACACCCAATGGCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAAAACAGAAGCATTGCTACACTTGCTATTACTACTCTCTTGAAGACAGGAAATGAATCAAGTGTGGACCGTCTTATGAAGCAAATCACAAATTTCATGTCTGATATTGCCGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTATGTTTGAAGTTCCCATTAAAATATAGATCTCTGATGAACTTCCTGAGTAGCATTCTCAGGGAAGAAGGTGGATTTGATTACAAGAAAGCAATTGTAGATTCAATTGTTATTCTTATTAGAGACATTCCTGATGCAAAGGAAAGTGGGTTGCTTCATTTGTGTGAATTCATTGAAGATTGTGAGTTCACTTATTTGTCCACACAGATACTGCACTTCCTGGGAGTTGAAGGGCCAAAAACATTAGACCCCAGCAAATATGTTCGTTATATTTATAACAGAGTGCATCTTGAGAATGCAACTGTCAGGGCCAGTGCTGTGAGCACACTGGCTAAGTTTGGTGCTGCAGTTGATGGATTGAAGATTTTTATTTTTGGGATTGACTTAAAATCTCATAATTACGCTCTTCAGCCTCACATATTTGTTCTCCTAAGGCGATGTCTTTTTGACAATGATGATGAGGTTCGTGATAGGGCAACACTTTATCTGAACACACTTGGAGGTGATGGTTCACTCGTTGAGACTGATAAAGATGTGAAGGACTTCCTCTTTGGGTCATTTGATATCCCACTTGTCAATCTAGAGAGTAGTTTGAAAAATTATGAGCCTTCAGAAGAGGCTTTCGACATTAACTCGGTGCCCAGGGTGGTCAAGTCTCAGCCTCTTACAGCGAAGAAAGCCACAAGTAAAAAACCAACTGGTTTGGGTGCTCCCCCATCTACCACAGATGCATATGAAAGGCTGCTGTTGTCCATTCCTGAGTTTGCAAACTTTGGGAAGCCTTTTAAGTGTGATGATATGCATTTTGATTCCTCACCGCCTGTGGAGCTTACTGAAGCAGAGACAGAATATGCAGTTAATGTTGTTAAACACATTTTTGATAGGCATGTTGTATTTCAGTACAACTGCATCAACACGATACCAGAACAGTTATTGGAAGATGTTATCGTAATTGTGGATGCATCAGAAGCAGAGGAATTTTCTGAGGTTTTCGCCAAGCCTCTCAGATCTCTTCCTTATGATTTACCTGGGCAGACTTTTGTGGCATTTGAGAAGCCCGAGGGATTGCCAACAGCTGGAAAATTTTCTAACGTTCTGAAATTTATTGTCAAAGAGATTCCTAATATATACTGCGCCGTGTATATTTCAAACTACAAGCTTGTTTTGTTGTTCTTTGGCAGGGAATTTGTTCTAAATAAAACCTATATTATTTTTGTGGAAATCTCATCTCCGCTTTATAAATTGGATATTGACCAGGTTGACCCAACCACTGGTGAGGCAGATGATGATGGTGTTGAAGATGAATATCAGCTTGAAGATCTGGAGGTTGTTGGAGCAGATTACATATTGAAAGTGGGGGTGTCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGGTTCTGAACGAGTGGATGAATATGGTCTCGGCCCAAGGGAGAGCTTGGCTGAAGCTGTAAATACAGTCACCAATCTTCTTGGAATGCAGCCTTGTGAGGGCACTGAAGTTGTTCCACCTAATTCAAGGTCACACACATGCTTGTTATCCGGTGTTTTTATCGGGAATGTGAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGATGGTCCAAAGGACGTTGCAATGAAACTGTCTGTCAGATCCGAGGACGAAGCTGTCAGCGATGCCATTCATGAGATTGTGGCTAGCGGCTAG 2865 0.4244 MAQPLVKKDDDHDDEDEYSPFLGIEKGGVLQEARVFNDPQLDARRCSQVITKLLYLLNQGESFSKVEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNAEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTIRSPLAQCLLIRYTSQVIRESGNNNTQSGDRPFYDYLESCLRHKSEMVIFEAAKAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSSILREEGGFDYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTLDPSKYVRYIYNRVHLENATVRASAVSTLAKFGAAVDGLKIFIFGIDLKSHNYALQPHIFVLLRRCLFDNDDEVRDRATLYLNTLGGDGSLVETDKDVKDFLFGSFDIPLVNLESSLKNYEPSEEAFDINSVPRVVKSQPLTAKKATSKKPTGLGAPPSTTDAYERLLLSIPEFANFGKPFKCDDMHFDSSPPVELTEAETEYAVNVVKHIFDRHVVFQYNCINTIPEQLLEDVIVIVDASEAEEFSEVFAKPLRSLPYDLPGQTFVAFEKPEGLPTAGKFSNVLKFIVKEIPNIYCAVYISNYKLVLLFFGREFVLNKTYIIFVEISSPLYKLDIDQVDPTTGEADDDGVEDEYQLEDLEVVGADYILKVGVSNFRNAWESMGPGSERVDEYGLGPRESLAEAVNTVTNLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDEAVSDAIHEIVASG 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0147 954 SUPERFAMILY Clathrin adaptor appendage domain 807 838 IPR013041 -
Lal2g0147 954 MobiDBLite consensus disorder prediction 612 631 - -
Lal2g0147 954 Pfam Adaptin N terminal region 29 557 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lal2g0147 954 Gene3D Coatomer, gamma subunit, appendage domain 629 771 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lal2g0147 954 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 837 951 IPR032154 -
Lal2g0147 954 Gene3D - 23 317 IPR011989 -
Lal2g0147 954 PANTHER COATOMER SUBUNIT GAMMA 1 764 - -
Lal2g0147 954 PANTHER COATOMER SUBUNIT GAMMA 801 954 - -
Lal2g0147 954 SUPERFAMILY ARM repeat 34 557 IPR016024 -
Lal2g0147 954 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 839 951 IPR009028 GO:0006886|GO:0016192|GO:0030117
Lal2g0147 954 Gene3D - 837 952 IPR012295 -
Lal2g0147 954 SUPERFAMILY Clathrin adaptor appendage domain 631 765 IPR013041 -
Lal2g0147 954 PIRSF Gamma-COP 7 952 IPR017106 -
Lal2g0147 954 Pfam Coatomer gamma subunit appendage platform subdomain 635 764 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lal2g0147 954 PANTHER COATOMER SUBUNIT GAMMA 1 764 IPR017106 -
Lal2g0147 954 PANTHER COATOMER SUBUNIT GAMMA 801 954 IPR017106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0147 Lal-Chr2 884535 890753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0147 K17267 - gmx:100789362 1557.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0147 2 884535 890753 Lal2g0147 2 884535 890753 ECH
Lal1g0231 1 1369915 1376250 Lal2g0147 2 884535 890753 LSH
Lal2g0147 2 884535 890753 Lal9g0165 9 1025288 1031316 LSH