Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0137 ATGGGAAAGGCGAAGGGAAAGCATCGTTTGGACAAGTACTACCACTTAGCGAAAGAACACGGTTACAGATCCAGAGCTTCATGGAAACTTGTTCAACTCAACTCCAAATTCCGATTCCTCGAATCGGCCCACGCCGTTCTCGATCTCTGCGCCGCTCCCGGCGGTTGGATGCAGGTCGCCGTCCAGCGTGTCCCTGTCGATCACCTCGTTATCGGCGTCGACCTCGCTCCTATCGCACCTATCCGCGGTGCCGTCGCAATCCAAGAAGATATAACTCGCACTGAGTGTAAGGCCAAAATTAAGAAGCTAATGAGCCAGCATGGTTGCAATGCCTTCGATGTTATATTGCATGATGGTTCGCCCAACATCGGTGGTGCTTGGGCTCAGGAAGCTACGAGCCAGAATGCTCTTGTTATTGATGCTGTTAAGCTGGCTACTCAATTTTTAGCTCCTAAGGGCATTTTCGTCACCAAGGTAATAAATTCTTCTAATTCTATTTCTGTCTTTTATGTGGATTGTTTAAACTCACAAACTGCTGGAAGTTTTGCACTGCAGCTGTTTGAGAAGGTTGAGGTGGATAAGCCAGCAGCTAGTCGTTCTGAATCTGCAGAAATATATGTTTTGGGCCTCAAGTACAAGGCCCCTGCAAAGATTGATCCGCGTCTTCTTGATTTTAAGCATCTCTTTCAGGGATCAGTGGAGCCCCAGTCAAAGGTTGTGGATGTGCTTAGAGATGCTAAACAGAAGAGACATCGTGATGGATATGAAGATGGAAACACAACTTTAAGGAAAATGTCTTCAGCTGCGAGTTTCATTTGGTCTGATTCTCCTCTGGAGATCCTTGGCTCAGTCACCTCCATAACCTTTACTGATCCAGCTGATTTACAAATCAAGGATCACATGTTAACAACTGAAGAGGTAAAATCTCTGTGTGATGATTTGAGGGTGTTGGGGAAGCAGGACTTCAAGCATCTTCTAAAGTGGCGGATTCACATTAGAAAAGCTCTTTCCCCTACTCAAAATCCTGATTCTACTACTAAAGTTGAGACGGAAGATGCGCCTAAGGTGGATGAAGATGATAGAATACTCAATGAAATGGAGGAGCTGACAAATGCAATGGACCGCAATAAGAAGCGTACAAAAAAGCTTCTTGCGAAAAGAAGAGCTAAGGATAAGGCTCGAAAAGCAACAGGGATGCAAATGGATGCAGTAGAAGATGGTTATGTTGATCATGAGTTATTTTCTCTTTCCTCTATCAAGGGAAAGAAGGACCTTGCAGCTGTTGATACAGTTGAATATGAAGGTGACGAGGGGGAAGCGGTTGACAGTGATAATGAAGATATCCATGAAGGACCAGAGCATTCATCCAGTGACTTGGAAGATTCTGATGAAGAACGTAAAAGATATGATGAACAAATGGATGAGTTTCTTGAGGGAGCTTATGAGCGGTTTGTGGTAAAAAAGGAAGGAACTGCAAAGCAGCGGAAGCGTATTAAGAAGTCATACAATGCAAAGGACCAACTTTTGGAGGATGGTGAGGATGACGGTATTGTTCAGCCCAAATATGATTCAGATGAAGATCAGGCTGCTCAAGAAGCAAATCCTTTGGTGGTGCCACTTAATGATGGGACAGAGCCCACCCAAGAGGAGATCACAAATAGGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAAGAAGGAGATTTTGTGAAAAACGAGAGTGAAGATGAAATGGATATAGATGTGCGGAAGGATAAAAAGTCCACAACAATAACAACCAAGGAGAAGAAATCCATTCTGAAAAAAGCCAAAGAAAATAAGACAGAAGCTCCTGCAGCTGCAGTGATAGACAAACCCCAATCTCAAGCATCTGAGGCAAAGGACGATTTTGAGATAGTTCCTGCGCCTGGTACTGATTCTAGTGATGATTCATCCTCGGATGAATCAGAAGATGATACTGAAACCAAAGCTGAGATATTGGCTTGTGCTAGGAAGATGCTGAGGAAAAAACAACGGGAGCTGATACTAGATGATGCATATAACAAGTATATGTTTGATGATGAGGGATTGCCCAAGTGGTTTTTGGATGAGGAGAAGAGACACCGTATACCAGTAAAGCCAGTCACCAAAGAGGAAATTGCTGCAATGAGAGCACAATTTAAAGAAATTGATGCCCGGCCTGCGAAAAAGGTGGCAGAGGCGAAAGCAAGAAAGAAACGTGTCGCAATGAGGAAGCTTGAGAAGGTACGTAAGAAGGCCAATGCTATATCTGATCAGACGGAGATATCTGATCGTTCGAAGAGTAAACAAATTGAAAAACTGTATAAAAAGGCCACCACTCCACAGAGGCCTAAAAAGGAATTTGTGGTAGCAAAGAAAGGTGTCCAAGTTAAGACTGGGAAGGGAAAAGTCCTTGTGGATCGCAGAATGAAGAAGGATGCTAGGACAAAAGGAATGGGTAGAGGAGGAAAAGGGGGTTCCAAGACTAAGGGCAAGGGCAGGGGGAAGGGCAAAGCACCTTCAAAGGGCAAAGCACCTTCGAAGGGTGGAAGAAAGGGGAAATAA 2568 0.4431 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFRFLESAHAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAVAIQEDITRTECKAKIKKLMSQHGCNAFDVILHDGSPNIGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKVINSSNSISVFYVDCLNSQTAGSFALQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDFKHLFQGSVEPQSKVVDVLRDAKQKRHRDGYEDGNTTLRKMSSAASFIWSDSPLEILGSVTSITFTDPADLQIKDHMLTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPTQNPDSTTKVETEDAPKVDEDDRILNEMEELTNAMDRNKKRTKKLLAKRRAKDKARKATGMQMDAVEDGYVDHELFSLSSIKGKKDLAAVDTVEYEGDEGEAVDSDNEDIHEGPEHSSSDLEDSDEERKRYDEQMDEFLEGAYERFVVKKEGTAKQRKRIKKSYNAKDQLLEDGEDDGIVQPKYDSDEDQAAQEANPLVVPLNDGTEPTQEEITNRWFSQDVFAEAVEEGDFVKNESEDEMDIDVRKDKKSTTITTKEKKSILKKAKENKTEAPAAAVIDKPQSQASEAKDDFEIVPAPGTDSSDDSSSDESEDDTETKAEILACARKMLRKKQRELILDDAYNKYMFDDEGLPKWFLDEEKRHRIPVKPVTKEEIAAMRAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDRSKSKQIEKLYKKATTPQRPKKEFVVAKKGVQVKTGKGKVLVDRRMKKDARTKGMGRGGKGGSKTKGKGRGKGKAPSKGKAPSKGGRKGK 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0137 855 MobiDBLite consensus disorder prediction 577 609 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 754 855 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 379 393 - -
Lal2g0137 855 Pfam Spb1 C-terminal domain 625 818 IPR012920 GO:0005634|GO:0006364|GO:0008168
Lal2g0137 855 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 213 IPR015507 GO:0001510|GO:0008168
Lal2g0137 855 PANTHER RRNA METHYLTRANSFERASE-RELATED 1 825 - -
Lal2g0137 855 Coils Coil 366 386 - -
Lal2g0137 855 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 825 IPR028589 GO:0008649|GO:0031167
Lal2g0137 855 MobiDBLite consensus disorder prediction 490 546 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 828 855 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 375 398 - -
Lal2g0137 855 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 1 825 - -
Lal2g0137 855 Gene3D Vaccinia Virus protein VP39 19 219 IPR029063 -
Lal2g0137 855 MobiDBLite consensus disorder prediction 433 472 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 567 658 - -
Lal2g0137 855 Pfam FtsJ-like methyltransferase 22 211 IPR002877 GO:0008168|GO:0032259
Lal2g0137 855 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 224 IPR029063 -
Lal2g0137 855 MobiDBLite consensus disorder prediction 754 793 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 501 528 - -
Lal2g0137 855 Pfam Domain of unknown function (DUF3381) 247 394 IPR024576 -
Lal2g0137 855 MobiDBLite consensus disorder prediction 803 820 - -
Lal2g0137 855 MobiDBLite consensus disorder prediction 445 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0137 Lal-Chr2 832537 838136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0137 K14857 - gmx:100790741 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0220 1 1299436 1305145 Lal2g0137 2 832537 838136 LSH