Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0118 ATGATGGCCTCTGCATCAGCAACTTTGCTAAAGTCATCAACAATTCTTGACAAGTCTGAGTGGGTTAAGGGCCAATCCCTCCGCCAAGCTTCTATTGTTTCAGTTGCAAGATGCAACTCCACCAACCCATCAGCATTCACCATCAGAGCTGGTTCCTATGCGGATGAGCTCGTTAAGACAGCGAAAACAGTTGCTTCACCGGGGCGTGGTATTTTGGCCATGGATGAGTCTAATGCTACAGCTGGGAAGCGTTTGGCTTCAATTGGGTTAGAAAACACAGAAGCTAACCGCCAGGCATACCGTACTCTCCTTGTGTCAGCTACAGGGCTTGGTAATTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAGTTGATGGCAAGAAGATCGTCGATGTACTTGTCGAGCAAAACATTGTTCCTGGTATTAAAGTTGACAAGGGTTTGGTGCCCCTGGTTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTGGACGGTCTTGCCTCTCGCACAGCTGCATACTACCAGCAGGGTGCCCGCTTCGCCAAATGGCGTACCGTTGTGAGCATCCCCAATGGTCCCTCTGCTTTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCAATTTCTCAGGACAATGGGTTGGTTCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACATAATATTGAAAGGACTTTCGAAGTCGCCCAAAAGGTCTGGGCTGAAGTTTTCTTCTACCTTGCTGAGAACAATGTTCTGTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCTGGAGCCGAGTCAAAGGAAAAGGCAACTCCTCAGCAGGTTGCTGACTACACCCTCAAGCTCCTTCACAGGAGAGTTCCCTCTGCTGTCCCTGGAATCATGTTCTTATCTGGAGGACAATCCGAGGTTGAAGCAACGCTAAACTTGAATGCCATGAACCAATCCCCTAACCCATGGCATGTGTCATTCTCATATGCGAGAGCCCTCCAGAACACTACATTGAAGACATGGGGAGGTCGCCCCGAGAACGTGAAGGCAGCACAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCATTGGCTCAGCTTGGAAAGTACACTGGCGAAGGTGAATCTGATGAAGCAAATAAGGAGTTGTTCGTTAAAGGTTACTCCTACTAA 1203 0.4904 MMASASATLLKSSTILDKSEWVKGQSLRQASIVSVARCNSTNPSAFTIRAGSYADELVKTAKTVASPGRGILAMDESNATAGKRLASIGLENTEANRQAYRTLLVSATGLGNYISGAILFEETLYQSTVDGKKIVDVLVEQNIVPGIKVDKGLVPLVGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIERTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKEKATPQQVADYTLKLLHRRVPSAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTTLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESDEANKELFVKGYSY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0118 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 400 - -
Lal2g0118 400 SUPERFAMILY Aldolase 46 400 - -
Lal2g0118 400 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 261 271 IPR029768 -
Lal2g0118 400 Gene3D Aldolase class I 35 399 IPR013785 -
Lal2g0118 400 CDD FBP_aldolase_I_a 54 380 - -
Lal2g0118 400 Pfam Fructose-bisphosphate aldolase class-I 56 400 IPR000741 GO:0004332|GO:0006096
Lal2g0118 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 400 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0118 Lal-Chr2 715536 718074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0118 44 400 Miscellaneous Gene Families AT3G52930 55.956 3.02e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0118 K01623 - gmx:100818915 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0118 2 715536 718074 Lal2g0118 2 715536 718074 ECH
Lal1g0193 1 1157077 1159903 Lal2g0118 2 715536 718074 ECH
Lal1g0193 1 1157077 1159903 Lal2g0118 2 715536 718074 LSH
Lal2g0118 2 715536 718074 Lal9g0136 9 879175 881985 LSH