Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0193 ATGGCCTCTGCATCTGCAACTCTGCTGAAATCATCACTGGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAAAACCTGCGCCAAGTTTCTGCTGTTTCTGTTGCAAGATGCAACTCCACCAACCCATCAACCCTTACCATCAGAGCTGGTTCCTATGCTGATGAGCTGGTTAAGACTGCGAAAACAGTTGCCTCACCAGGGCGCGGTATTTTGGCGATGGATGAGTCTAATGCAACCGCTGGGAAGCGTTTGGCTTCGATTGGATTAGAGAACACCGAAGCTAATCGCCAAGCATACCGTACCCTCCTTGTGTCAGCTCCAGGTCTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAAGAAACTCTCTACCAATCCACAGTTGATGGCAAGAAGATTGTTGATGTACTTGTTGAGCAGAACATTGTCCCTGGTATTAAAGTTGACAAGGGTTTGGTGCCCCTGGTTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTGGACGGTCTTGCATCTCGAACAGCTGCATACTACCAGCAAGGTGCCCGCTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTTAAGGAGGCAGCCTGGGGTCTGGCTCGTTACGCTGCAATTTCTCAGGACAATGGGTTGGTTCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACATAATATTGAAAGGACTTTCGAAGTCGCCCAAAAGGTCTGGGCTGAAGTTTTCTTCTACCTTGCTGAGAACAATGTTCTATTTGAGGGTATTCTCCTGAAGCCTAGCATGGTTACTCCTGGAGCTGAGTCCAAGGAAAGAGCATCTCCTCAGAAGGTTGCTGACTACACCCTCAAACTCCTTCACAGGAGAGTTCCCTCTGCTGTCCCTGGAATTATGTTCTTATCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCCCCTAACCCATGGCACGTGTCGTTCTCGTACGCTCGAGCTCTCCAGAACACTACATTGAAGACATGGGGAGGCCTTCCTGAGAACGTGAAGGCAGCACAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTGGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGATGAAGCAAAGAAGGAGTTGTTCGTCAAAGGCTACTCCTACTAA 1200 0.4933 MASASATLLKSSLVLDKSEWVKGQNLRQVSAVSVARCNSTNPSTLTIRAGSYADELVKTAKTVASPGRGILAMDESNATAGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTVDGKKIVDVLVEQNIVPGIKVDKGLVPLVGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIERTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKERASPQKVADYTLKLLHRRVPSAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTTLKTWGGLPENVKAAQDALLFRAKSNSLAQLGKYTGEGESDEAKKELFVKGYSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0193 399 CDD FBP_aldolase_I_a 53 379 - -
Lal1g0193 399 SUPERFAMILY Aldolase 45 399 - -
Lal1g0193 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
Lal1g0193 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 - -
Lal1g0193 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 IPR000741 GO:0004332|GO:0006096
Lal1g0193 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Lal1g0193 399 Gene3D Aldolase class I 7 398 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0193 Lal-Chr1 1157077 1159903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0193 52 399 Miscellaneous Gene Families AT3G52930 56.534 3.43e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0193 K01623 - gmx:100818383 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0193 1 1157077 1159903 Lal1g0193 1 1157077 1159903 ECH
Lal1g0193 1 1157077 1159903 Lal2g0118 2 715536 718074 ECH
Lal1g0193 1 1157077 1159903 Lal2g0118 2 715536 718074 LSH
Lal1g0193 1 1157077 1159903 Lal9g0136 9 879175 881985 LSH