Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0098 ATGGGTTTCTTCAGCGCTATATTGGGGTTTTTCGGATTTGGAATTGGGATTTCAATTGGTCTTGTAGCTGGCTATTTTTTCTTCATCTACTTTCAACCTACTGATGTTAAGGATCCTGAAATCAAGCCACTGGCGGAGCAGGACTCAAAAACTTTGCAAAAAATGCTTCCTGAGATTCCTCTTTGGATTAAAAATCCCGACTTTGATAGGGTTGACTGGCTCAACAAGTTTATAGAATATATGTGGCCTTACCTTGACAAGGCAATTTGCAAGACTGCCAAGAACATTGCTAAACCCATAATTGCTGAGCAGATTCCGAAGTATAAAATTGATTCTGTTGAGTTTGAAACTCTCACACTGGGCTCCCTGCCCCCTACTTTTCAAGGTATGAAAGTTTACGTGACTGATGAAAAGGAGTTAATTATGGAGCCTTCTGTAAAATGGGCTGGGAATCCCAATGTCACTCTATCTGTTAAGGCATTTGGGCTGAAAGCAACCGTTCAGGTTGTGGATTTGCAAGTTTTTCTCGCACCTCGTATTACTTTGAAGCCTTTAGTTCCAAGCTTTCCTTGCTTTTCCAACATCTATGTCTCCCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAGCTTGTAGGGGCTGATCTTATGTCTATTCCTGGTGTCTACAGGTTTGTTCAGGAGCTTATCAAAGATCAGGTTGCGAACATGTATCTATGGCCCAAAACCCTGGAAGTTCCAATACTAGATCCAACAAAGGCCATGAGGAGGCCTGTTGGAATCTTACACGTGAAAGTTCTGAGAGCATTGAAGTTAAAGAAGAAGGATATTCTTGGTGCATCTGACCCTTATGTGAAGCTAAAGTTGAGTGATGATAAGATGCCATCGAAAAAGACTACTGTCAAGCACAAGAACTTGAATCCTGAATGGAAGGAGGAATTTAATTTGGTTGTTAAAGATCCCGAGTCCCAGGTTTTAGAGATTAATGTTTATGACTGGGAGCAGGTTGGGAAGCATGATAAGATGGGTATGAATGTGATCTCTTTAAAAGACGTTCCCCCTGAAGAGCCTAAAGAATTTACTCTTAGCCTCCTAAAAAATATGGATCCTAATGATGTCCAAAACGAGAAGCCACGTGGGCAGATTGTTGTAGAATTGACATATAAACCCTTCAAGGAGGATGAGTTGGACAAGGGTTTTGAAGAGACACAGTCAGTACAAAAAGCTCCTGAAGGTACTCCTGCTGGTGGAGGTCTGCTTGTAGTTAGAGTCCATGAAGCTCAAGATGTTGAAGGGAAGCACCACACTAATCCATATGCTCGAATTACTTTCAGCGGGGAGGAGAAGAAGACCAAGCGTGTTAAAAAGAACAGAGATCCAAGATGGGATGAAGAATTCCAATTTACGTTGGAGGAACCTCCCACTAACCAAAGGTTACATGTGGAGGTTATCAGCACTTCATCAAGAAACCTGCTTCATCAAAAGGAATCATTGGGTTATATCGACGTAAGTCTGGCAGATGTTGTTTCTAACAAGAGAATCAATGAGAAGTACCATCTTATTGATTCCAAGAATGGCCGCATCCAGGTAGAGTTGCAATGGAGAACTTCATAA 1614 0.417 MGFFSAILGFFGFGIGISIGLVAGYFFFIYFQPTDVKDPEIKPLAEQDSKTLQKMLPEIPLWIKNPDFDRVDWLNKFIEYMWPYLDKAICKTAKNIAKPIIAEQIPKYKIDSVEFETLTLGSLPPTFQGMKVYVTDEKELIMEPSVKWAGNPNVTLSVKAFGLKATVQVVDLQVFLAPRITLKPLVPSFPCFSNIYVSLMEKPHVDFGLKLVGADLMSIPGVYRFVQELIKDQVANMYLWPKTLEVPILDPTKAMRRPVGILHVKVLRALKLKKKDILGASDPYVKLKLSDDKMPSKKTTVKHKNLNPEWKEEFNLVVKDPESQVLEINVYDWEQVGKHDKMGMNVISLKDVPPEEPKEFTLSLLKNMDPNDVQNEKPRGQIVVELTYKPFKEDELDKGFEETQSVQKAPEGTPAGGGLLVVRVHEAQDVEGKHHTNPYARITFSGEEKKTKRVKKNRDPRWDEEFQFTLEEPPTNQRLHVEVISTSSRNLLHQKESLGYIDVSLADVVSNKRINEKYHLIDSKNGRIQVELQWRTS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0098 537 SMART C2_3c 261 361 IPR000008 -
Lal2g0098 537 SMART C2_3c 419 517 IPR000008 -
Lal2g0098 537 Gene3D C2 domain 256 412 IPR035892 -
Lal2g0098 537 CDD C2 262 364 - -
Lal2g0098 537 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 248 IPR039010 -
Lal2g0098 537 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 535 IPR035892 -
Lal2g0098 537 Gene3D C2 domain 419 536 IPR035892 -
Lal2g0098 537 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Lal2g0098 537 Pfam C2 domain 419 520 IPR000008 -
Lal2g0098 537 Pfam C2 domain 260 361 IPR000008 -
Lal2g0098 537 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 256 392 IPR035892 -
Lal2g0098 537 ProSiteProfiles C2 domain profile. 398 518 IPR000008 -
Lal2g0098 537 CDD C2 420 521 - -
Lal2g0098 537 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Lal2g0098 537 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 1 536 - -
Lal2g0098 537 PRINTS C2 domain signature 277 289 IPR000008 -
Lal2g0098 537 PRINTS C2 domain signature 304 317 IPR000008 -
Lal2g0098 537 PRINTS C2 domain signature 326 334 IPR000008 -
Lal2g0098 537 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 536 IPR045050 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0098 Lal-Chr2 603222 613751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0098 247 516 Lipid Metabolism Gene Families AT3G61300 27.148 1.09e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0098 - - gmx:100803978 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0098 2 603222 613751 Lal2g0098 2 603222 613751 ECH
Lal2g0098 2 603222 613751 Lal9g0119 9 778027 783179 LSH