Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0094 ATGAATATGAAGGAGGAATCCAACAAACCCAATTCTCTATACGACACTTCCCCATCACACACTCTTCTCGCTAAGCTTCCATACCCAATTGAAGAAACCGTTTCCGATGAACCCGATTCTACCCCTTACCTTCAAATCTCTTACAATCATGGCCCTCGATCCTTCAAGGATCTCCCTTTCCTCTTCATCTTCCTCCTCTTCCTTCTCTCCACCTTCGCCTTCGGTATCTTCGCCTTCATCCACCGCAACCCCAACTACTCCACTCTCTCTTCCTTCTCCTTCAACCCCAACACTACCTCTTGTGTCAAATCCTCCGTTTCTACATCATCTTCTTCTAACTTGGTGTTTGTTTCCCTCAATTTTTATTCAACTAATTCTCCTTATATTGTGAAGGATTTAACATGGACACTCGTTGCCACCTTCATTTTGAGCTTACCCATTTGCTGGCTCCTTCTTCTTTCACTCAAACATTACACCAAACACCTTGTCTACGCTTCCCTCCCACTCTTCATCCTCATCCCTATCTTTCTTAACGTGTATTGGTTTGTTGCCTGCACTTTAAGCTCCACTTGCAGCCACTCGTTCCCTCTGGCCTATAGGATTCTGGTGCTGGTATTCATCTTTTTGATAATTGGGGTCATCGTGTGGATCTTGATGGTGAATTGGCATAGGATTGAACTCACTGTGAGCATAATTGGTGTCGCATCTAACGCGCTTTCATGGAATTTGGGGTTGTTGGGGGTGCTACCTTCTTTGTCAATTGGGCTGTTGGTGTATTATGTGCCAATTGTGTTGTTCATGGTGTTTGCGAGGTTTAATGGGAAGGTCGTGCCAAAGAATTTACATGGTGGTGAATATGATTGTGTTTGGAAGGAGGATAGTTGGGTGCCTGCTTATTTTACACTGGCGATTCTCACTATGTTGTGGTCTGCAACGGCTATGAAGGAAGCTCAAGTTTATGTTATCAGTGGGACTGTTGCTCATTGGTATTTCTCCAAGGAGGATGAAGCTCGTAGGCGGAGTATTAGAACTTCTTTAAGAAATGCTTTTGGAACTTCTTCTGGAACAGTATGTTTATCAGGGTTGCTTGTCTGTGTTGTTCGAGTGGTGCGATCTGCAGTTGATAATGCAAGACAAGAGGATGCTACTGGGATAGTGAACCTTGTATTGCGGTGCTGTGTAAATGCCTTACTTACAACATTTGATTTTCTTAATAAGTTTACCATAAACTTTGCTGCAATAACTGGTGAAGCTTACTGCTCATCTGCAAGGATGACATATGAACTTCTAAGGCGTAATCTTCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCCTCTTAGCTGGAATTGTCTTTGTCCTCTCTGCAATATACACAATTGTGGTCTGTGCTATATTAAAAGGTGTGACTAATCTTGGGTCTGATTCATATTTAGTGGCTGCGTTGGCTTGGGTGCTTCTGATATTAGTGCTGGCTTTCGTTGTGCATGTGCTAGACATTGTAATTGACACAATTTATGTGTGCTATGCAATAGACAGAGACAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTTTATGTCCACTTACCCATTAGTAGAAGTCTCAGACAATCTATTACTAGAAGAACTCTAGTTGTGTAA 1647 0.4281 MNMKEESNKPNSLYDTSPSHTLLAKLPYPIEETVSDEPDSTPYLQISYNHGPRSFKDLPFLFIFLLFLLSTFAFGIFAFIHRNPNYSTLSSFSFNPNTTSCVKSSVSTSSSSNLVFVSLNFYSTNSPYIVKDLTWTLVATFILSLPICWLLLLSLKHYTKHLVYASLPLFILIPIFLNVYWFVACTLSSTCSHSFPLAYRILVLVFIFLIIGVIVWILMVNWHRIELTVSIIGVASNALSWNLGLLGVLPSLSIGLLVYYVPIVLFMVFARFNGKVVPKNLHGGEYDCVWKEDSWVPAYFTLAILTMLWSATAMKEAQVYVISGTVAHWYFSKEDEARRRSIRTSLRNAFGTSSGTVCLSGLLVCVVRVVRSAVDNARQEDATGIVNLVLRCCVNALLTTFDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLAGIVFVLSAIYTIVVCAILKGVTNLGSDSYLVAALAWVLLILVLAFVVHVLDIVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSITRRTLVV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0094 548 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 43 529 IPR007603 GO:0022857|GO:0055085
Lal2g0094 548 PANTHER CTL-LIKE PROTEIN DDB_G0288717 43 529 - -
Lal2g0094 548 Pfam Plasma-membrane choline transporter 206 515 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0094 Lal-Chr2 584999 588566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0094 - - gmx:100810591 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0094 2 584999 588566 Lal2g0094 2 584999 588566 ECH
Lal1g0152 1 975785 980464 Lal2g0094 2 584999 588566 LSH