Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0152 ATGAATATGAGAGAGGAACCCAACAAACCCAATTCTCTATACGACACTTCTTCATCACACCCTCTTCTCGCTAATCTCCCATACCCATCATCATCATTATCTTCACCAATCGAAGAAAATGCCTCAGACTCTGCCCCTTACCTACACATCTCTTACAATCACGGTCCTCGCTCCTTCAATGACCTTCCTTTCCTTTTCCTCTTCATCCTCTTCTCTCCACCTTTGCTTTCGGCATCTAAGCTGTCTTCCACCAGAATCCCAACTACTCCACTCTCTCTTCCTTCTCCTTCAACCCCAACACCTCCTCTTGTGTTAAATGGGAAGGTTGTGCCGAAGCATTTACATGGTGGTGAATATGATTGCGTTTGGAAGGAGGATAGTTGGGTGCCTGCTTATTTCGCATTGGCGATTCTCACTATGTTATGGTCTGCAACGGCTATGAAGGAAGCTCAAGTTTATGTTATTAGTGGGACTGTTGGTCATTGGTATTTCACCAAGGAGGATGAAACCCGTAGAAATGCTTTTGGTCCTTCTTCTGGCACAGTATGTTTATCAGGATTGCTTGTATCTGTTGTTCGAATGGTGCGATCTGCAGTTGATAATGCAAGACGAGAGGATGATACTGGGATAGTGAACCTTGTATTACGGTGCTGTGTTAATGCATTGCTTGCAGCATTTGATTTTCTTAATAAATTTACAATAAACTTTGCTGCAATAACTGGCGAAGCTTACTGCTCATCTGCAATGATGACATATGAACTTCTTAGACGTAATCTCCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCCTCCTGGCTGGAATTGTATTTGTCATCTCAGCAATATACACAATTGTGGTCTGTGCTATATTAAATGGTGTGACTAATCCTTGGTCTGATTCATATTTTGTTGCTGCATTGGCTTGGTTGCTGCTGATATTAGTGCTGGGGTTCCTTGTGCATGTGCTAGATATTGTAATTGACACAATTTATGTCTGCTACGCGATAAACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTGCATGAGGTTTATGTTAACTTACCCATTAGTAGAAATCTCAGACAACCCATTACTAGAAACACTCTAGGCGTGTAA 1122 0.4242 MNMREEPNKPNSLYDTSSSHPLLANLPYPSSSLSSPIEENASDSAPYLHISYNHGPRSFNDLPFLFLFILFSPPLLSASKLSSTRIPTTPLSLPSPSTPTPPLVLNGKVVPKHLHGGEYDCVWKEDSWVPAYFALAILTMLWSATAMKEAQVYVISGTVGHWYFTKEDETRRNAFGPSSGTVCLSGLLVSVVRMVRSAVDNARREDDTGIVNLVLRCCVNALLAAFDFLNKFTINFAAITGEAYCSSAMMTYELLRRNLLSAVFVETISSRLLAGIVFVISAIYTIVVCAILNGVTNPWSDSYFVAALAWLLLILVLGFLVHVLDIVIDTIYVCYAINRDRGEVCKQDVHEVYVNLPISRNLRQPITRNTLGV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0152 373 Pfam Plasma-membrane choline transporter 63 339 IPR007603 GO:0022857|GO:0055085
Lal1g0152 373 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g0152 373 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 121 355 IPR007603 GO:0022857|GO:0055085
Lal1g0152 373 PANTHER CTL-LIKE PROTEIN DDB_G0288717 121 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0152 Lal-Chr1 975785 980464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0152 - - gmx:100810591 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0152 1 975785 980464 Lal1g0152 1 975785 980464 ECH
Lal1g0152 1 975785 980464 Lal2g0094 2 584999 588566 LSH