Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0083 ATGCCGAAGCCTTGTTACTTGCAAATCAACATTAATGGGCAGCATATATTCCTTGTGAACGAGAAGATTATATCAAGATACTGTGGAAGGGTGAAGAAAATATTGAATCATGAAGAGAGAAGAAAGAAGTTTGAGATTAGAATCAATGATTTCCCTGGAGGCCCTAGAGGGTTTGAGCTAGTTTCAAGGTTCTGTTACAACAAAGGCAAAATCACAATCACTGTTGCTAATGTGCCTCTCCTTCATTGCTGTGCTATTTATCTTGGAATGAATGAGGATATCTTCACTAACAATCTGTTGCAACAAACAGAAACTTTTCTTAAGGGTATCTATTATTGGAAATGGAATGACATACTTGTAAGTCTTATGAGCTGTGAGCTACTTTATACATATGCAGATTGCTATGGTTTCTTAGATAACATCATTTGTGCACTCTTAGCAAAGATTGTTCAAAATTCAGATGCAAACCTCTTTGCTTCCTCACCCTCATCATCATCATATTCTTCACCAGATAGCAATTCATTTAAGAGATTCTCTTCTTCAACCAAAACAACCCCAGAAAAAATCAACTCAACTTTGCAAAGCAAAGCATGGTGGTTTGATGATTTGACCAGTTTACACCCAAAGATCATTGAGAAACTTTTTCAGTGTGTGGGAGCATACAAAACTGATAACAACAACTTAGTCCTTACAAGATTTTTGTTGCATTATCTGAAAACAGCTACTCAAACTAGAGCTGTTAATTGTAGAAATAGTAATGAGTATGCTGCACTGGCAGAAACAGCTGTTTATGGTGTCATATTGGTACGTAAGAAGATTTTTTCTTGTAGAGGCCTTTTTTGGGTGCTAAGGATTGTATCCGGGTTTGGGTTGAACAGAGATTGCAGAACTGAGCTAGAGAAAATGATTGGTGGGATGCTTGAGCAAGCTACATTGGATGATCTTCTGGTATCAGGGCATGAAATGGGAGTTTATTATGATGTTGATCTGGTAATAAGATTGGTTAGACTATTTGTTGATATCAATGGCTTTGATGGGGTGTCTAGGCAGAAAATGAAAAGGGTCGGAAGATTAGTTGATAAGTATTTGAGGGAGATATCCCCTGACCATAAACTCAAGATCTCTAAATTTCTTAGAGTTGCAGAATGTTTGCCAGACTCTGCCAGGGACTGCTTTGATGGGGTCTATAGAGCCATTGACATCTATCTTGAGTCTCATCCAAGAATCACATTTGAGGAAAGATCAAGATTGTGTAGATGTCTCAATTACAGTAAACTCAGCTTTGAAGCTAGTAAGGATATTGCCAAGAGTCCCAGAATACCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAACAAACAAAAATTCCAACAAGTGAATTCGGAACCATGAGTCCAAGAATGAATCATTCCCAAGTAGTTTTATACAATGAAGACAAAGCAGGAAGCTTAAAAGACAAGACTCAAAAGCAAGAGAGAATGCAAAGGAGAGTTGTAGAAGTGAAGAAATTATGCAAGGAAATGAATGGTCAAGTGTCAAAGTTTGTAAGCCATAAAATGTTGCTTAATCCTGCAACATTTTGTTAA 1587 0.3743 MPKPCYLQININGQHIFLVNEKIISRYCGRVKKILNHEERRKKFEIRINDFPGGPRGFELVSRFCYNKGKITITVANVPLLHCCAIYLGMNEDIFTNNLLQQTETFLKGIYYWKWNDILVSLMSCELLYTYADCYGFLDNIICALLAKIVQNSDANLFASSPSSSSYSSPDSNSFKRFSSSTKTTPEKINSTLQSKAWWFDDLTSLHPKIIEKLFQCVGAYKTDNNNLVLTRFLLHYLKTATQTRAVNCRNSNEYAALAETAVYGVILVRKKIFSCRGLFWVLRIVSGFGLNRDCRTELEKMIGGMLEQATLDDLLVSGHEMGVYYDVDLVIRLVRLFVDINGFDGVSRQKMKRVGRLVDKYLREISPDHKLKISKFLRVAECLPDSARDCFDGVYRAIDIYLESHPRITFEERSRLCRCLNYSKLSFEASKDIAKSPRIPPRIAMQALISQQTKIPTSEFGTMSPRMNHSQVVLYNEDKAGSLKDKTQKQERMQRRVVEVKKLCKEMNGQVSKFVSHKMLLNPATFC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0083 528 Pfam NPH3 family 198 431 IPR027356 -
Lal2g0083 528 MobiDBLite consensus disorder prediction 163 185 - -
Lal2g0083 528 ProSiteProfiles NPH3 domain profile. 197 455 IPR027356 -
Lal2g0083 528 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 508 - -
Lal2g0083 528 PANTHER OS12G0117600 PROTEIN 2 508 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0083 Lal-Chr2 495899 498294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0083 28 465 EF-hand Containing Proteins AT3G44820 26.220 1.34e-46 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0083 - - gmx:100808259 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0134 1 881015 883332 Lal2g0083 2 495899 498294 LSH