Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0134 ATGCCTAAGTCTTGTGACTTGAAAATCAACATTAATGGTCAGCAGATATTCCTTGTGAACCAGAAGATTATAACAAAGTACTGTGGAAAGGTGAAGAAAATATTGAAACATGAAAAGAGAAGAAAGAAGTTGGAGATTAGAATGAATGATTTCCCTGGAGGCCCTTATGGGTTTGAGATAGTTTCAAGGTTCTGTTACAACAAAGGCAAAATTCCAATCACTGTAGCTAATGTGTCTCTCCTTCATTGCTGTGCCATTTATGTTGGAATGAGTGAAGAGGTCTTCACCAACAATCTCTTGCAACAAACAGAAACTTTTCTTAAGGAAATCTATTATTGGAAATGGAATGACATACTTGTAAGTCTCATAAGTTGTGAGCTACTTTATACTTATGCAGATTGCTATGGTCTCTTAGATAAGATCATTTATGCACTCTTAGCAAAAATTGCTCAAAATTCAGATGCAAACCTCTTCACTTCCTCATCTTCATCATCATTGTCATTGTCATATTCTTCACCAGATAGCAATTCTATTAAGAGATTCTCTTCTTCAACAAAAACTACACCAGAAAAAATCAACTCAACTTTGCCAAGCAAAGCATGGTGGTTTGATGATTTGACCACTCTACCCCCAAATATCATTGGGAAGCTTTTTCAGTGTGTTGGAGCATACAAAACTGATAACAACAACTTAGTCCTTACAAGATTTTTGTTGCATTATCTGAAAACAACTACTCAAACTAGAGCTGTTAATGGTAGAAACAACAGTGAGTATGCTGCACTTGCAGATACTGCTGTTTATGGGGTTATATTGGTAGGTAAAAAGATTTTTTCATGTAGAGGGCTTTTCTGGGTGCTAAGGATTGTATCTGGCTTTGGATTGAGTATAGAATGCAGAACTGAACTGGAGAAAATGATAGGAGGAATGCTTGAACAAGCTACATTGGATGATCTTCTAGTATCAGGGCATGATATGGGAGTTTATTATGATGTTAATCTGGTGATAAGATTGGTTAGACTATTTGTTAATATGAGTGGTTTTGATGGATTGTCTTTGCAGAAAGTGAAAAGGGTTGGTAGATTAGTTGACAAGTATTTGAGGGAAATATCTCCTGACCATAACCTTAAGATCTCTAAATTTCTTGGAGTTGCAGAATGCTTGCCAGACTCTGCAAGAGAATGCTTTGATGGGGTCTATAGAGCCATTGACATATATCTTGAGTCTCATCCAAGGAGCACATTTGAGGAAAGATCAAGATTGTGTAGATGTCTGAATTATAGTAAACTCAGCTTTGAAGTTAGTAAAGATATGGCCAAGAGTCCCAGAATACCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAAAAAACAAAAATACCAACAACTGAGTTTGTACCTGAGAGGTCAAAAATGAACCCTTCTCAAATACTTTTGTATAATGAAGACAACAACACAGAGAGTTTCATCCTAGAGAAAATGCAAAGGAGAGTTGTAGAACTGGAAAAATTATGCAAGGAAATGGATGGTCATTTGTCAAAGTTGGTAGGCCATAGAGTGTTGTTTAATCCTGCTCCTTCTAGACCCTTACTAAGATTTTGTTGA 1602 0.3652 MPKSCDLKININGQQIFLVNQKIITKYCGKVKKILKHEKRRKKLEIRMNDFPGGPYGFEIVSRFCYNKGKIPITVANVSLLHCCAIYVGMSEEVFTNNLLQQTETFLKEIYYWKWNDILVSLISCELLYTYADCYGLLDKIIYALLAKIAQNSDANLFTSSSSSSLSLSYSSPDSNSIKRFSSSTKTTPEKINSTLPSKAWWFDDLTTLPPNIIGKLFQCVGAYKTDNNNLVLTRFLLHYLKTTTQTRAVNGRNNSEYAALADTAVYGVILVGKKIFSCRGLFWVLRIVSGFGLSIECRTELEKMIGGMLEQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVNMSGFDGLSLQKVKRVGRLVDKYLREISPDHNLKISKFLGVAECLPDSARECFDGVYRAIDIYLESHPRSTFEERSRLCRCLNYSKLSFEVSKDMAKSPRIPPRIAMQALISQKTKIPTTEFVPERSKMNPSQILLYNEDNNTESFILEKMQRRVVELEKLCKEMDGHLSKLVGHRVLFNPAPSRPLLRFC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0134 533 Pfam NPH3 family 201 433 IPR027356 -
Lal1g0134 533 ProSiteProfiles NPH3 domain profile. 200 458 IPR027356 -
Lal1g0134 533 SUPERFAMILY POZ domain 4 92 IPR011333 -
Lal1g0134 533 MobiDBLite consensus disorder prediction 166 192 - -
Lal1g0134 533 Coils Coil 490 510 - -
Lal1g0134 533 PANTHER OS12G0117600 PROTEIN 2 507 IPR043454 -
Lal1g0134 533 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0134 Lal-Chr1 881015 883332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0134 4 462 EF-hand Containing Proteins AT3G44820 26.523 5.16e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0134 - - gmx:100808259 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0134 1 881015 883332 Lal2g0083 2 495899 498294 LSH