LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g0080	ATGAGTTCGAAAACCCTAATGGATTTTTGGCAACCAGCTTCGAAGCGATTGAAGCAAACCCTCACTCCATCAAACTCCAAATCCGATGATCCAACCACCACTTCACTCTCCGTTCACCAAAAATCCAAAAGCAATCTCAATATCTGTCTCCAAAAGGTCTCCGATTCTAAATCCAAAGGGTTTTTTGTAGCACTTGAGGAGTTAATGGTGGAAGAGACATGGTTGGAAGCTCTCAATGGTGAACTTCAAAAACCCTATGCCATTTCCCTTTCCAAATTTGTGGGAACTGAGATTGGCAGCGGCAATTTCGTATATCCTCCTTCTCATTTGATTTTCAATGCTCTTAATTCTACTCCTTTTGATACAGTTAAAGCTGTCATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCGATGGGCCTCTCATTCTCAGTGCCTGAGGGTGTCAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTTAAGGAAGACCTTGGCTGTTCGATTCCTCCCCATGGAAACCTAGAGAAATGGGCTGTGCAGGGAGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAACTCTCATGCAAAAAAGGGCTGGGAACAATTTACTGATTTTGTTATAAAGACAATCTCACAGAAGAAGGAAGGGATTGTGTTTCTGTTGTGGGGAAATTCTGCTCGGGCAAAAGCGAGGTTAATCGATGCAACAAAGCATCACATTCTTCAAGCTGCACATCCTTCTGGGTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGTAA	804	0.4353	MSSKTLMDFWQPASKRLKQTLTPSNSKSDDPTTTSLSVHQKSKSNLNICLQKVSDSKSKGFFVALEELMVEETWLEALNGELQKPYAISLSKFVGTEIGSGNFVYPPSHLIFNALNSTPFDTVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKEDLGCSIPPHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDFVIKTISQKKEGIVFLLWGNSARAKARLIDATKHHILQAAHPSGLSANRGFFGCR	267

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g0080	267	SMART	UDG_2	116	264	IPR005122	-
	Lal2g0080	267	SMART	UDG_2_a	116	264	-	-
	Lal2g0080	267	Hamap	Uracil-DNA glycosylase [ung].	71	267	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lal2g0080	267	CDD	UDG-F1-like	86	267	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lal2g0080	267	ProSitePatterns	Uracil-DNA glycosylase signature.	124	133	IPR018085	GO:0006281\|GO:0016799
	Lal2g0080	267	SUPERFAMILY	Uracil-DNA glycosylase-like	68	267	IPR036895	-
	Lal2g0080	267	TIGRFAM	ung: uracil-DNA glycosylase	72	267	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lal2g0080	267	Pfam	Uracil DNA glycosylase superfamily	121	263	IPR005122	-
	Lal2g0080	267	Gene3D	-	51	267	IPR036895	-
	Lal2g0080	267	PANTHER	URACIL-DNA GLYCOSYLASE	7	267	IPR002043	GO:0004844\|GO:0006281\|GO:0006284

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g0080	Lal-Chr2	482654	485397	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g0080	K03648		-	gmx:100818241	417.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal1g0130	1	864746	867103	Lal2g0080	2	482654	485397	LSH