Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0130 ATGGTTCAATCACTGTTATACCTTCTCTCTTTGATGGTGGAAGAGACGTGGTTGGAAGCTCTAAATGGAGAATTACAAAAACCCTATGCCCTTACTCTTTCCAAATTTGTCCAAACTGAGATTTTCAATGCTCTTAATTCTACTCCCTTTAGTACACTCAAGGTTGTTATCCTTGGCCAGGGAGTTCTCTTGCTCAACGCTGTTCTCACAGTTAGGAAGCATCAAGCGAATTCTCATGCAAAAAAGGGCTGGGAACAATTTACTGATACTGTTATCAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTAATTGATGCAACAAAGCATCACATTCTTCAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGTTTCTTTGGCTGCAGGCACTTTTCTCTCACTAACCAACTTCTGGAGCTAAATGGGATCGGTCCAATAGATTGGCAACTATGA 459 0.4118 MVQSLLYLLSLMVEETWLEALNGELQKPYALTLSKFVQTEIFNALNSTPFSTLKVVILGQGVLLLNAVLTVRKHQANSHAKKGWEQFTDTVIKTISQKKEGVVLIDATKHHILQAAHPSGLSANRGFFGCRHFSLTNQLLELNGIGPIDWQL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0130 152 Gene3D - 60 152 IPR036895 -
Lal1g0130 152 Gene3D - 2 59 IPR036895 -
Lal1g0130 152 SUPERFAMILY Uracil-DNA glycosylase-like 12 152 IPR036895 -
Lal1g0130 152 SMART UDG_2 17 140 IPR005122 -
Lal1g0130 152 PANTHER URACIL-DNA GLYCOSYLASE 60 152 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lal1g0130 152 PANTHER URACIL-DNA GLYCOSYLASE 11 60 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lal1g0130 152 CDD UDG-F1-like 29 150 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lal1g0130 152 SMART UDG_2_a 17 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0130 Lal-Chr1 864746 867103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0130 K03648 - gmx:100818241 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0130 1 864746 867103 Lal2g0080 2 482654 485397 LSH