Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0077 ATGATTCTCCAACCACCTTCTGCGACCTTCCTTTTCTCCCACATTTTCTCTTCTACTCCTTGTCCTTGCACCAATGAACTTAATCACTTTCTTCCTTTCCCTTTCTCCCGAAGAAGAAGAAGAAGAAGAAAACGTTTCATTGCGCATTCTGGGTCTAGGAATTCCCCAACAAAATTGAGTCTTCGTTTCTGTGCTATTCCCCCAGATAATAGTTCCAACCGAAATTGGAACACGGAATTCGCAAATTCAACTAGAAGGGGTGCCAAAAGTTTCGTTTTTAATCAGATTACTGATGAAATTGTCGAGGATAATGATCATGGTGTGTCTCCTTCTCAAGAGTCACAACAGATTCAGTTAGGTTCAAATTTCACCAATTTTCAAGAAGACCCTATTGTAGATAAGTTAAGAACACAATTGGGGGTGATTCACCCAATTCCATCGCCTCCTATTAACCGCAACGTGGCTGGTTTGTTTGTGTTCTTTTTCTTTGTTGGCGTTGTGTTTGATAAATTGTGGTCTTCAAGGAGAAGGAACAAAGTTAGCAGTGAAGATACCTTGCGTGGCGTGTGGCCACAGGTGCCAACCAGCTTCTCTTTGTTTTTGGAAAAGGATTTGCAGAGAAAAGAATCAGTTGAATGGGTGAACATGGTGCTTGGGAAGTTATGGAAGGTTTATAGAGGTGGAATTGAGAACTGGATTATTGGGTTGCTTCAGCCTGTTATTGATGACTTGAAGAAACCTGATTATGTGCAAAGGGTTGAGATTAAGCAATTCTCATTGGGGGATGAACCTTTGTCAGTTAGGAATGTTGAGCGCAGGACTTCTCGCCGTGTGAACGATTTGCAGTACCAGATAGGAGTTAGGTATACTGGTGGTGCTCGCATGTTATTAATGCTTTCTCTAAAATTTGGCATTATTCCAATTGTGGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGCGAGCTTTGGGTAAAATTGCGATTAATACCAACACAACCCTGGGTGGGAGCTGCTTCATGGGCTTTTGTTTCTCTTCCAAAGATCAAGTTTGAATTGTCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTACTCTCAATGTTTCTGACAAGACTTCTCACTGAAGATTTACCCAGACTATTTGTACGCCCAAAGAAAATTGTTTTGGATTTCCAAAATGGAAAAGCAGTTGGTCCTGTTGCAAACGATGTTAAATCTGGAGAGATGCAAGATGGAAACAAAGATTCTGTCGGTGAACTATCTGTTACCCTTGTGGATGCTCGAAAGCTTTCTTATCTCTTCTATGGAAAGACAGATCCTTATGTTATTCTCAGTCTTGGAAATCAAACTATACGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCAATTTGGAACCAAGATTTTCATATGCTTGTCGCCAACCCTAAAAAGCAGAAGTTACTTGTCCAGGTTAAGGACTCTCTGGGATTTGCAGATTTGACTATTGGTACAGGGGAGGTTGATTTGGTATCTCTTAAAGACACAGTACCAACAGACAGGATAGTGGTTTTACAAGGAGGTTGGGGAATATTAGGAAAGGGTTCTTCTGGGGAGATATTACTACGGCTAACATATAAAGCATATGTGGAGGATGAAGAAGATGACAAGACTGAGGTGGATGCCATTGATATAGATGCTTCAGATGATGAATTGTCTGATTCAGATGAGAAGAATGAAGGAGATCCTATGTACCGAACTGATAATGAGTCATTTATGGATGTATTAGCAGCATTAATTATAAGTGAGGAATTCCAAGGAATAGTGGCATCTGAAACTGGGTCTACCAGAATTTTGGATAATAGCTCAAATACAGGCTCCAAAGTATCAAAGTCTACTGTTGCCAATGCTGAAACAATTTCTTCTACTTCTGACAACTCTGAAGGTTTTGTAGGGTCGGCATTATTTTGGTTTGCTGTGATTACTAGTATATCACTACTAATTGCAATCAACATTGGCGGTTCAAGTTACTTCAATCCTTGA 2043 0.4058 MILQPPSATFLFSHIFSSTPCPCTNELNHFLPFPFSRRRRRRRKRFIAHSGSRNSPTKLSLRFCAIPPDNSSNRNWNTEFANSTRRGAKSFVFNQITDEIVEDNDHGVSPSQESQQIQLGSNFTNFQEDPIVDKLRTQLGVIHPIPSPPINRNVAGLFVFFFFVGVVFDKLWSSRRRNKVSSEDTLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDDLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGVRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTQPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTRLLTEDLPRLFVRPKKIVLDFQNGKAVGPVANDVKSGEMQDGNKDSVGELSVTLVDARKLSYLFYGKTDPYVILSLGNQTIRSKKNSQTTVIGPPGMPIWNQDFHMLVANPKKQKLLVQVKDSLGFADLTIGTGEVDLVSLKDTVPTDRIVVLQGGWGILGKGSSGEILLRLTYKAYVEDEEDDKTEVDAIDIDASDDELSDSDEKNEGDPMYRTDNESFMDVLAALIISEEFQGIVASETGSTRILDNSSNTGSKVSKSTVANAETISSTSDNSEGFVGSALFWFAVITSISLLIAINIGGSSYFNP 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0077 680 MobiDBLite consensus disorder prediction 559 587 - -
Lal2g0077 680 MobiDBLite consensus disorder prediction 559 577 - -
Lal2g0077 680 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 33 680 - -
Lal2g0077 680 ProSiteProfiles C2 domain profile. 407 523 IPR000008 -
Lal2g0077 680 SMART C2_3c 421 525 IPR000008 -
Lal2g0077 680 Gene3D C2 domain 401 550 IPR035892 -
Lal2g0077 680 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 207 394 IPR031468 GO:0008289
Lal2g0077 680 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 420 548 IPR035892 -
Lal2g0077 680 Pfam C2 domain 420 515 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0077 Lal-Chr2 466313 473974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0077 437 557 Acyl Lipid Metabolism Gene Families AT4G13550 29.508 5.32e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0077 - - adu:107477171 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0128 1 850833 856139 Lal2g0077 2 466313 473974 LSH
Lal2g0077 2 466313 473974 Lal9g0105 9 668610 672965 LSH