Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0075 ATGAAAAGAGGAGCATTTATTCTGAATTCTTGTAACGCTTTACCTTTGTTCTTGTTCCGAAGATCTCTTATTATCTCTTCCACCGCCATGTCTCGTTCTGATCACTGGACGGCTAAGCGCGTGAGAGACACCTTCATCCGTTTCTTCAAATTAAAGGAACATACCTTTTACAAATCTAGTCCTGTTGTCCCTTACAATGACCCAACTCTTCTCTTCGCTAACGCTGGCATGAACCAATTCAAGCCAATTTTTTTGGGAACTGCGGATCCTAATATTGAATTGAGCAAACTTACCCGTGCTTGCAATACCCAAAAGTGCATTCGAGCAGGTGGTAAACACAACGATCTTGATGACGTGGGAAAAGATACATACCACCACACTTTCTTTGAGATGCTGGGGAATTGGTCATTCGGGGATTACTTTAAAAAAGAAGCCATTGGCTGGGCATGGGAACTTCTAACCAGGTTGAAGTGCTTTGTGATAGACAAGATAGCTAAGCCGGCTTCAGCTGAAGTCCTTGTTATTCTTTCTCGGGGGTTTACCTTGCCTATTTATAAATTACCAACAGACCGCATTTATGCAACATATTTTGGTGGTGATGATAGTTCTGGTCTTGCCCCTGATACCGAGGCTAGAGATATTTGGCTTGCCTTTTTACCTCCTGAACATGTGCTTCCTTTTGGCTGTAAGGACAATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGTCCTTGCACTGAAATACATTTTGACAGAATAGGTAACCGTGATGCAGCATCTTTGGTTAATAATGATGACCCTACTTGCATTGAGATATGGAACCTTGTCTTTATTCAGTTCAATAGGGAAGCCGATGGCTCGCTTAAACCTCTACCTGCTAAGCATGTTGATACTGGGATGGGTTTTGAAAGATTGACCTCTATACTTCAGAACAAAATGAGCAATTATGACACCGATGTCTTCTTGCCTATCTTTGATGCTATTCAGCTGGCAACTGGTGCTAGGCCTTATTCTGGGAAAGTTGGACAAGAGGATGAAGATAAAGTTGACATGGCATACAGGGTCATTGCAGATCATATCAGAACCCTGTCATTTGCTATTGCTGATGGGTCTCGTCCTGGTAATGAGGGCCGTGAGTATGTTCTGAGGCGCATACTACGTCGAGCTGTTCGTTATGGACAGGAAGTGTTAAAAGCTAAGGAGGGCTTTTTCAATGGGCTTGTAAGTGTTGTGGTGAGTGTCATGGGTGATGTTTTCCCTGAGCTAAAAGAACGAGAAGGACACATCGTGGAAGTGATTGCAGAGGAGGAGGAAAGTTTTGGGAGAACCTTACTTAAGGGGATTGATAAATTTAAGAAATTTAAGTCAGCTGCTCAAGATGCTAAGAGAAAGACACTGAGCGGAGAGGCAAGTAAAACCTGTTCTTTTCATGGGGAAGCATTTCTCTTGTGGGATACGTATGGGTTCCCATTAGATCTTACTCAGCTGATGGCAGAAGAAGCGCAATTGCTTGTTGACGTTGAAGGTTTTAATAGTGCCATGGAAGATGCAAGGGAGAGATCAAGAAATGCTCAAACAAAGCAAGCTGGTGGTGTCATTGTTATGGATGCTGATGCCACTGCAGCATTAAACAGAAGGGATGTTGCTCCGACGGATGACAGCTTCAAATATGTTTGGGAGGACCATGAAAGCGTGGTAAAAGCAATATATACTGGTTCTGAGTTTGTTGATTCTGTTAATACTAATGGGGACATTGGTATAGTTCTGGAATCTTCAAGCTTCTATGCTGAACAAGGTGGTCAGATTTTTGATACTGGATCACTTAAGGGTCCTTATGCTTTGTTTCAAGTCCATAATGTGCAAGCTTATGGGGGTTACATTCTACACATTGGTTCTAATGGAACTGGCATCTCTGTTGGCGAAAAAGTTGTATGTCAGGTTGATTACGAAAGGCGCAAACTTATAGCCCCTAACCATACCTGCACACATATATTAAACTTTGCTCTTAGGAAAGAACTTGGCGATCATGTTGACCAAAAAGGATCTATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCACGGCAAGCCTGTTGATGCTAAAACTTTAGAGAAAATTGAGGATATTGTTAATGAGCAAATCAATGCTAAATTGGATGTAAGTGCAAAGGAGGCATCTCTCGCTGAAGCTAAGCGTGTCAATGGTTTACGAGCTGTCTTTGGAGAAGTCTATCCTGATCCAGTTAGAATTGTGTCAATCGGACAAAAAGTTGAGGATCTCATTGCCGATCCCGGTAACGAAAAATGGCTATCTATTTCAGCAGAATTATGTGGCGGTACCCATATTGTAAACACAGGAGAAGCTAAAGCTTTTGCACTTTTATCTGAGGAGGGAATTGCAAAAGGAATCCGTAGAATAACAGCTGTCACAGCTGATCGTGCTTATGATGCAAAGAAAGCGGCAGATGTGTTTGAGAAGCAAGTGGATGATGCAGATAAGTTAGAAGGAAGTTTGTTGGAAGAGTTCGATCAGTTGAACCCTGAAGGGGCTGGACGTGGTTCACATCTAGTGACTGGAGATGGTCGAACCCAGTCAACCCCTTGCAGAACCAGCTACTGGATTGGAACCAGTGTAGTGAAAGTTTCATATTTGAATCGCACGGTGGAAACACTATCAATTTCTGCAGCCAAGAAAACTGGCATCAAGGATAAGATTGCCAAACTTCAGGCTAAAGTGAGAATAGCACAAAAACAGCTAGCTGAAGCAAACAAACGTGAAGCTGTAAGGATCGCAGTTGAGAAGGCTGAACTTGCAGCTTCGAAGGGGTTACCTTTTTCTATATCTCACGTGGATGTTGGTCTTGATGTAGCCGCAGTTCGCGAAGCTGTTACAAAAGTCATGGAGCAAAAGGGGCTATCTGTAATGGTGTTCAGTACTGATGAATCTACAAACAAAGCTGTAGTTTGTGCTGGGGTCCCAGAGAAAGGAGATGGTGAGAAGCTTGACGTGTCAGAGTGGCTGAGTAATGCTTTGGGGCCTCTTAAAGGGAAATGTGGCAAAGGAAAAGGTGGTCTTGCGACCGGACAGGGTACAGAAGCATCACATGTGAATGAGGCTATGGAGCTTGCAGCATCATTTGCATCAATGAAATTGAGTTAA 3162 0.4292 MKRGAFILNSCNALPLFLFRRSLIISSTAMSRSDHWTAKRVRDTFIRFFKLKEHTFYKSSPVVPYNDPTLLFANAGMNQFKPIFLGTADPNIELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTRLKCFVIDKIAKPASAEVLVILSRGFTLPIYKLPTDRIYATYFGGDDSSGLAPDTEARDIWLAFLPPEHVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVGQEDEDKVDMAYRVIADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGQEVLKAKEGFFNGLVSVVVSVMGDVFPELKEREGHIVEVIAEEEESFGRTLLKGIDKFKKFKSAAQDAKRKTLSGEASKTCSFHGEAFLLWDTYGFPLDLTQLMAEEAQLLVDVEGFNSAMEDARERSRNAQTKQAGGVIVMDADATAALNRRDVAPTDDSFKYVWEDHESVVKAIYTGSEFVDSVNTNGDIGIVLESSSFYAEQGGQIFDTGSLKGPYALFQVHNVQAYGGYILHIGSNGTGISVGEKVVCQVDYERRKLIAPNHTCTHILNFALRKELGDHVDQKGSIVLPEKLRFDFSHGKPVDAKTLEKIEDIVNEQINAKLDVSAKEASLAEAKRVNGLRAVFGEVYPDPVRIVSIGQKVEDLIADPGNEKWLSISAELCGGTHIVNTGEAKAFALLSEEGIAKGIRRITAVTADRAYDAKKAADVFEKQVDDADKLEGSLLEEFDQLNPEGAGRGSHLVTGDGRTQSTPCRTSYWIGTSVVKVSYLNRTVETLSISAAKKTGIKDKIAKLQAKVRIAQKQLAEANKREAVRIAVEKAELAASKGLPFSISHVDVGLDVAAVREAVTKVMEQKGLSVMVFSTDESTNKAVVCAGVPEKGDGEKLDVSEWLSNALGPLKGKCGKGKGGLATGQGTEASHVNEAMELAASFASMKLS 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0075 1053 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 36 821 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Lal2g0075 1053 PANTHER BNACNNG61840D PROTEIN 881 1052 - -
Lal2g0075 1053 PANTHER BNACNNG61840D PROTEIN 184 842 - -
Lal2g0075 1053 PANTHER BNACNNG61840D PROTEIN 26 164 - -
Lal2g0075 1053 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 317 528 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Lal2g0075 1053 SUPERFAMILY ThrRS/AlaRS common domain 647 823 IPR018163 GO:0000166
Lal2g0075 1053 Hamap Alanine--tRNA ligase [alaS]. 36 1052 IPR023033 GO:0004813
Lal2g0075 1053 Pfam DHHA1 domain 907 1046 IPR003156 GO:0003676
Lal2g0075 1053 Gene3D Bira Bifunctional Protein; Domain 2 36 313 IPR045864 -
Lal2g0075 1053 Pfam tRNA synthetases class II (A) 41 651 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Lal2g0075 1053 Coils Coil 899 926 - -
Lal2g0075 1053 SUPERFAMILY Class II aaRS and biotin synthetases 36 316 IPR045864 -
Lal2g0075 1053 SUPERFAMILY Translation proteins 574 647 IPR009000 -
Lal2g0075 1053 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 749 807 IPR012947 GO:0004812|GO:0005524|GO:0043039
Lal2g0075 1053 CDD AlaRS_core 38 312 - -
Lal2g0075 1053 TIGRFAM alaS: alanine--tRNA ligase 184 1030 IPR002318 GO:0000166|GO:0005737
Lal2g0075 1053 Gene3D - 545 647 - -
Lal2g0075 1053 PRINTS Alanyl-tRNA synthetase signature 114 125 IPR002318 GO:0000166|GO:0005737
Lal2g0075 1053 PRINTS Alanyl-tRNA synthetase signature 297 310 IPR002318 GO:0000166|GO:0005737
Lal2g0075 1053 PRINTS Alanyl-tRNA synthetase signature 354 370 IPR002318 GO:0000166|GO:0005737
Lal2g0075 1053 PRINTS Alanyl-tRNA synthetase signature 378 391 IPR002318 GO:0000166|GO:0005737
Lal2g0075 1053 SMART tRNA_SAD_4 749 808 IPR012947 GO:0004812|GO:0005524|GO:0043039
Lal2g0075 1053 Gene3D - 940 1048 - -
Lal2g0075 1053 Gene3D - 648 823 - -
Lal2g0075 1053 PANTHER ALANYL-TRNA SYNTHETASE 881 1052 - -
Lal2g0075 1053 PANTHER ALANYL-TRNA SYNTHETASE 26 164 - -
Lal2g0075 1053 PANTHER ALANYL-TRNA SYNTHETASE 184 842 - -
Lal2g0075 1053 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0075 Lal-Chr2 446067 457378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0075 K01872 - gmx:100788271 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0123 1 812265 823980 Lal2g0075 2 446067 457378 LSH