Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0062 ATGAGGCCTCAGAGAACGCCGATCCACACAATCACAACATGGGTCAAGAAACAACCCCCAAAGGTCAAGGCTTTTCTCGCCGTCGTTTCCGGCATGGCGGCTCTCGTTCTCCTCCGCTTCATTGTTCACGATCATGACAATCTCTTCGTTGCTGCTGAGGCTGTCCACTCAATTGGTATTTCTGTCCTCATATATAAGCTCATGAAGGAGAAGACATGTGCCGGATTATCACTCAAATCCCAGGAATTAACAGCTATCTTTTTAGCTGTTAGACTGTACTGCAGCTTTGTCATGGAATATGATATACACACCCTACTTGATTTTGCTACTTTTGCTACAACTCTCTGGGTTATATACATGATTCGTTTCAAATTAAAGGCTAGTTACATGGAGGAGAAAGATAACTTTGCAATATACTATGTGAGTCAGCTTGTTGATGCACCCTATTCAATGCAGGTGATACCCTGTGCTGTGTTAGCCTTGCTTATTCATCCATCAACTTCTCATCATCTATTGAACAGGATTTCCTGGGCATTTTGTGTATATCTGGAAGCTGTTTCAGTACTACCCCAACTGCGGGTCATGCAGAACACCAAAATTGTTGAGCCATTCACAGCTCATTATGTATTTGCTTTGGGCGTTGCAAGATTCTTGAGTTGTGCTCATTGGGTTCTTCAGGTGTTAGATACTCGTGGACATTTGTTGGTCGCACTGGGGTATGGTTTGTGGCCATCAATGGTTCTTATCTCAGAAATTGTCCAGACCTTCATCTTAGCAGATTTCTGTTACTATTATGTCAAAAGTGTTTTTGGAGGGCAGCTTGTTCTTCGTCTTCCCTCTGGAGTGGTGTGA 852 0.4331 MRPQRTPIHTITTWVKKQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFATTLWVIYMIRFKLKASYMEEKDNFAIYYVSQLVDAPYSMQVIPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0062 283 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 PRINTS ER lumen protein retaining receptor signature 177 197 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 PRINTS ER lumen protein retaining receptor signature 199 213 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 PRINTS ER lumen protein retaining receptor signature 213 231 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 282 - -
Lal2g0062 283 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 282 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal2g0062 283 Pfam ER lumen protein retaining receptor 72 225 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0062 Lal-Chr2 347115 351741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0062 5 283 Miscellaneous Gene Families AT2G21190 84.946 2.39e-178 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0062 - - gmx:100803652 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0062 2 347115 351741 Lal2g0062 2 347115 351741 ECH
Lal1g0108 1 722134 725465 Lal2g0062 2 347115 351741 LSH