Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0108 ATGAGGCCTGGGAGAACGCCGATCCATACAATCACGACATGGGTTAGGAAACAACCACCAAAGGTGAAGGCTTTTCTCGCCGTCGTTTCAGCCATGGCGGCTCTCGTTCTTCTCCGTTTCATTGTTCACGATCATGACAACCTCTTTGTTGCTGCTGAGGCTGTCCACTCAATCGGTATTTCTGTCCTCATTTATAAGCTCATCAAGGAGAAAACCTGTGCCGGATTATCACTCAAATCCCAAGAATTAACAGCTATCTTTCTAGCTGTTAGGCTGTATTGTAGTTTTGTCATGGAATATGATATACACACCCTACTTGATTTTGCTACTTTTGTAACTACACTCTGGGTTATGTACATGATTCGTTTTAAACTGAAGGCTAGTTACATGGAGGAGAAGGACAACTTTGCAATATACTATGTGGTGATACCCTGTGGTGTGTTAGCGTTGCTTATACATCCATCAACTTCTCATCTTCTATTTAACAGGATTTCCTGGGCTTTTTGTGTATATCTAGAAGCAGTTTCAGTACTACCCCAACTACGGGTCATGCAGAACACCAAAATTGTTGAGCCATTCACAGCTCATTATGTATTTGCTTTGGGCGTCGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGATACCCGTGGACATTTGTTGGTTGCCTTGGGGTATGGTTTGTGGCCACCAATGGTTCTTATCTCAGAAATTGTCCAGACCTTCATCTTAGCTGATTTCTGTTACTATTATGTCAAGAGTGTTTTCGGTGGACAACTTGTTCTTCGTCTCCCCTCTGGAGTGGTGTGA 819 0.4322 MRPGRTPIHTITTWVRKQPPKVKAFLAVVSAMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLIKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFVTTLWVMYMIRFKLKASYMEEKDNFAIYYVVIPCGVLALLIHPSTSHLLFNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPPMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0108 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-RELATED 3 271 - -
Lal1g0108 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal1g0108 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 3 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0108 Lal-Chr1 722134 725465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0108 5 272 Miscellaneous Gene Families AT2G21190 86.940 6.62e-177 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0108 - - gmx:100803652 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0108 1 722134 725465 Lal1g0108 1 722134 725465 ECH
Lal1g0108 1 722134 725465 Lal2g0062 2 347115 351741 LSH