Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0049 ATGTTTTTGGTTAAACCCATTTTTCGAACACACCAAAGACCCTCTTCCACCCTTTGGCTACTTCACCACACGTTTAGTTCCTCAGCAGCCGCAGTTCAAGCTGAAAAGACCATCAAAGACGGCCCCAGAAACGATTGGACCAGAGATGAAATCAAATCCGTTTACGATTCTCCCATTCTCGATCTCCTCTTTCATGGGGCTGAAGTTCACAGAAATGCTCATAACTTCAGGGAAGTGCAGCAGTGTACTCTGATGTCAATTAAAACAGGTGGGTGTAGTGAAGATTGTTCATATTGTCCTCAATCCTCTAGGTATGATACTGGTCTCAAATCCCAACGACTTACCAACAAGGACGCTGTTCTCCAGGCTGCACAAAAGGCAAAAGAGGCTGGGAGCACTCGCTTTTGTATGGGTGCTGCATGGAGGGAGACAGTAGGAAGAAAGACAAACTTCAACCAGATCCTTGATTATGTAAAAGACATAAGAATTATCAACTACTATGAAAAGGAGCCACCGTGTCTACGAACTTTGGTGTTGTTTGGTAACATTTGGGCTGTCTACCTTCACTCTAGGGATATGGGGATGGAGGTGTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGAACTCAAGAAGGCAGGTCTGACAGCCTATAATCACAATCTTGACACTTCAAGGGAATACTATCCAAAAATCATTACAACAAGGACTTACGATGAGCGCCTAAAGACCCTTGAGTTCGTTCGTGATGCAGGGATCAATGTTTGTTCTGGAGGAATTATCGGGCTTGGAGAAGCAGAGGATGACCGAGTAGGTTTGTTACACACATTGTCAACCCTCCCCACTCATCCTGAGAGCGTTCCTATTAATGCACTTATTGCTGTAAAGGGAACCCCTCTAGAGGATCAGAAGCCTGTAGAAATATGGGAGATGATTCGAATGATAGCCACGGCGCGTATCATAATGCCAAAAGCAATGGTGAGGCTATCAGCAGGCAGAGTTAGATTCTCTATGCCTGAGCAAGCATTGTGCTTTCTTGCTGGTGCAAATTCTATCTTCACTGGTGAAAAGCTTCTTACAACTGCTAACAATGATTTTGATGCTGATCAACTCATGTTTAAAGTTCTTGGTTTGATCCCAAAAGCTCCAAGCTTTAACGAAGACCAAACTAGGGAGGCAGAGGATTTAAAGGAAGCTGCTTCTTCTAGTTGA 1218 0.445 MFLVKPIFRTHQRPSSTLWLLHHTFSSSAAAVQAEKTIKDGPRNDWTRDEIKSVYDSPILDLLFHGAEVHRNAHNFREVQQCTLMSIKTGGCSEDCSYCPQSSRYDTGLKSQRLTNKDAVLQAAQKAKEAGSTRFCMGAAWRETVGRKTNFNQILDYVKDIRIINYYEKEPPCLRTLVLFGNIWAVYLHSRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPKIITTRTYDERLKTLEFVRDAGINVCSGGIIGLGEAEDDRVGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTANNDFDADQLMFKVLGLIPKAPSFNEDQTREAEDLKEAASSS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0049 405 CDD Radical_SAM 89 318 - -
Lal2g0049 405 Hamap Biotin synthase [bioB]. 44 383 IPR002684 GO:0004076|GO:0009102
Lal2g0049 405 Gene3D Aldolase class I 178 384 IPR013785 -
Lal2g0049 405 Gene3D Aldolase class I 43 171 IPR013785 -
Lal2g0049 405 TIGRFAM bioB: biotin synthase 192 380 IPR002684 GO:0004076|GO:0009102
Lal2g0049 405 PANTHER BIOTIN SYNTHASE 190 398 IPR002684 GO:0004076|GO:0009102
Lal2g0049 405 PANTHER BIOTIN SYNTHASE 27 163 IPR002684 GO:0004076|GO:0009102
Lal2g0049 405 PIRSF Biotin_synth 178 389 IPR024177 -
Lal2g0049 405 PIRSF Biotin_synth 27 168 IPR024177 -
Lal2g0049 405 SMART BATS_2 290 382 IPR010722 -
Lal2g0049 405 SFLD BATS domain containing 45 374 - -
Lal2g0049 405 Coils Coil 388 405 - -
Lal2g0049 405 SMART MiaB 82 319 IPR006638 GO:0003824|GO:0051536
Lal2g0049 405 Pfam Radical SAM superfamily 89 276 IPR007197 GO:0003824|GO:0051536
Lal2g0049 405 ProSiteProfiles Radical SAM core domain profile. 77 335 IPR007197 GO:0003824|GO:0051536
Lal2g0049 405 SFLD Radical SAM 45 374 IPR007197 GO:0003824|GO:0051536
Lal2g0049 405 Pfam Biotin and Thiamin Synthesis associated domain 290 380 IPR010722 -
Lal2g0049 405 SUPERFAMILY Radical SAM enzymes 44 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0049 Lal-Chr2 282737 289875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0049 K01012 - gmx:732577 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0089 1 617070 620957 Lal2g0049 2 282737 289875 LSH