Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1170 ATGGCAGATTCAATCTCAAAGGCTCTGATTTTCATTATGTTCTTCCTTCTATGTTCCTCTAACTCACACGCTTCTTCTGATGTACCATTCATCGTAACTCACAAAAAGGTTAACCTTAACAGACTCAAATCTGGCGCTGAAACTGTCTCTGTCACCATCGATATCTACAATCAAGGATCCTCGACTGCATATGACGTGAGTCTATTAGATGATAGCTGGCCAAATGATGCTTTTGATGTAATCGGTGATAGCATTTCGAAGTCATGGGAAAAGCTTGATGCTGGTGGCATCCTTTCCCACACATTTGACCTGGAGGTGAAAACAAAGGGAGTATTTTCTAGCGAACCAGCTGTCGTAAAGTTCCGCGTCCCGACAAAGGCCGCTTTGCAGGAGGCATATTCAACTCCCATATTGCCTTTAGATGTTCTTGCTGATCGAACTCCCAAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTTGCTAAGGGTGGACCTGTATTCTCGGTGATCTCGATAATGGTACTGTTTGTATACCTGGTTGCTTCACCATCAAAATCTGGTACCAAGGGAGGCAAGAAAAAGCGTTAA 585 0.4359 MADSISKALIFIMFFLLCSSNSHASSDVPFIVTHKKVNLNRLKSGAETVSVTIDIYNQGSSTAYDVSLLDDSWPNDAFDVIGDSISKSWEKLDAGGILSHTFDLEVKTKGVFSSEPAVVKFRVPTKAALQEAYSTPILPLDVLADRTPKKKFEWAKRLLAKGGPVFSVISIMVLFVYLVASPSKSGTKGGKKKR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1170 194 PANTHER BNAA02G28300D PROTEIN 8 188 - -
Lal25g1170 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 8 188 - -
Lal25g1170 194 Pfam Translocon-associated protein beta (TRAPB) 15 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1170 Lal-Chr25 15150696 15154004 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1170 K13250 - gmx:100500066 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1170 25 15150696 15154004 Lal25g1170 25 15150696 15154004 ECH
Lal25g1170 25 15150696 15154004 Lal10g0184 10 2292131 2295248 LSH