Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0184 ATGGCAGATCCAATCTCAAAGACACTGATTCTTCTTTATGTGTTCTTCATTCTATTCTTCTTCTCCAATTCACACGCTTCCTCTGATGTTCCTTTCATCGTTGCTCATAAGAAAGCTAATATCAACAAACTCAAAACTGGTTCAGAAACTGTCTCTGTTACCATTGACATCTACAATCAAGGATCCTCGACTGCGTATGATATAAGTCTAGTGGATGATAGCTGGCTAAATGATGCTTTTAACGTAATCGGCGGTAGCACTTCCAAGTCATGGGAAAAGCTTGATGCTGGTGGCATCCTCTCCCACACTTTTGAGTTGGAGGTTAAAACAAAGGGTGTATTTTCTAGTGAACCAGCTGTCGTAAAGTTCCGCATCCCCACAAAGGCTGTTTTACAGGAGGCATATTCAAGTCCCATATTGCCTTTAGATGTTCTTGCTGACAGACCTCCCGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAGGTACGGATCTATAATCTCGGTGATCTCCATCATGGTTCTGTTTGTATACCTAGTTGCTTCACCATCAAAATCCGTTGCCAAAGCAAGCAAGAAGAGGCGTTAA 591 0.4247 MADPISKTLILLYVFFILFFFSNSHASSDVPFIVAHKKANINKLKTGSETVSVTIDIYNQGSSTAYDISLVDDSWLNDAFNVIGGSTSKSWEKLDAGGILSHTFELEVKTKGVFSSEPAVVKFRIPTKAVLQEAYSSPILPLDVLADRPPEKKFEWAKRLLARYGSIISVISIMVLFVYLVASPSKSVAKASKKRR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0184 196 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 10 195 - -
Lal10g0184 196 PANTHER TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT BETA-LIKE 10 195 - -
Lal10g0184 196 Pfam Translocon-associated protein beta (TRAPB) 17 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0184 Lal-Chr10 2292131 2295248 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0184 K13250 - gmx:100500066 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0184 10 2292131 2295248 Lal10g0184 10 2292131 2295248 ECH
Lal25g1170 25 15150696 15154004 Lal10g0184 10 2292131 2295248 LSH