Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1079 ATGGTGAATAATCAGGAGAATATTGGTAAAATGGCAATCTCTGATGGTAGTTACAACTACTACTTCCAATGTTATGCTTTAGGGAGCAATGCCAAAAGCAACTCAATGTTCAAAGCCCCTCTTCTATCTATGGGCCTGGACCCGGAAGGTTTGTTGGATTCTGATTCAGTTCGGAGTCCCACTTCTCCACTAGATTTTACATTTTCGAATCTCGGCAACCCCTCTAGGAGATTGGATTGTAGTAAAGTAGGTCTAAGCATTATAGATTCATTGGAGGACGATAATGAGAAGCCTTGTTTATGTCCCCAAATGGTTATCAAGGCCCCAAATTGTAAAACCTGCATGGAGTCTGTTAAGGCATCGGAGTCTTTACCTGAAGATTTTTGTAAGCTTTCTTATACGAAAAACGGTTCTACTTTCCACAAGGGTGAATCCTCCACTGTTATTTTTGAGAATGCAGAAATCCTCCTAGAGAATGCTCCATTTGGAAAAACTAGTTCTTGTTCATTATATTCTGACGGTTTTGCTGCCTTCAACGAAGTGAGTTCTCATCCTCGTGATTTTATCGGAGGATGCAAAAACTCAAACACATTTCTAACAACAGAATCGAATGCAAGCCTTGTGTCCGTATGCTCCTCTATTGACTTTGTCAAGTCTCTATCTGCTAGTGAGATTGAACTATCTGAGGACTACACATGTAATGACGAGAAAAAGGAGGGAGTGTCCTCCGCGGTGGTTAACAGGTCACAGACTCCTAACCAGTATCCCTCTATTGACTTCTTAAGTCTCTGCTACCATTGCAACAAGAAACTTGAAGAGGGGAAACATATTTACATATATAGAGGTGAAAAAGCGTTTTGCAGTTTAGCTTGCCGTGCCTTTGAGATCACGACCGATGAGGAGATGGAGAAATCCGGTCCAGATTCTGAAAACTCTTCAAAGTGGGAATCTGTTGAGGAGCTTTTTGAAACAGGCATTCCCGCAGCCACAAAGCAACCAAATTACCATTAA 1011 0.4154 MVNNQENIGKMAISDGSYNYYFQCYALGSNAKSNSMFKAPLLSMGLDPEGLLDSDSVRSPTSPLDFTFSNLGNPSRRLDCSKVGLSIIDSLEDDNEKPCLCPQMVIKAPNCKTCMESVKASESLPEDFCKLSYTKNGSTFHKGESSTVIFENAEILLENAPFGKTSSCSLYSDGFAAFNEVSSHPRDFIGGCKNSNTFLTTESNASLVSVCSSIDFVKSLSASEIELSEDYTCNDEKKEGVSSAVVNRSQTPNQYPSIDFLSLCYHCNKKLEEGKHIYIYRGEKAFCSLACRAFEITTDEEMEKSGPDSENSSKWESVEELFETGIPAATKQPNYH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1079 336 ProSiteProfiles Zinc finger FLZ-type profile. 259 303 IPR007650 -
Lal25g1079 336 PANTHER FCS-LIKE ZINC FINGER 11 173 233 IPR044585 -
Lal25g1079 336 PANTHER FCS-LIKE ZINC FINGER 11 234 324 IPR044585 -
Lal25g1079 336 PANTHER FCS-LIKE ZINC FINGER 11 13 172 IPR044585 -
Lal25g1079 336 PANTHER DUF581 FAMILY PROTEIN 173 233 - -
Lal25g1079 336 PANTHER DUF581 FAMILY PROTEIN 13 172 - -
Lal25g1079 336 PANTHER DUF581 FAMILY PROTEIN 234 324 - -
Lal25g1079 336 Pfam zinc-finger of the FCS-type, C2-C2 253 302 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1079 Lal-Chr25 14115914 14117756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1079 - - ccaj:109787938 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1079 25 14115914 14117756 Lal17g0259 17 1602916 1605805 PCT
Lal25g1079 25 14115914 14117756 Lal4g0241 4 1522717 1525224 PCT
Lal17g0259 17 1602916 1605805 Lal25g1079 25 14115914 14117756 PCT
Lal4g0241 4 1522717 1525224 Lal25g1079 25 14115914 14117756 PCT