Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0259 ATGGGAAAAGTACAAAACCAAAGCAATTCTGTGGAGAGAGAGAGAGAAGTAGTAGTATTTCAGAAGAAGCTCACTGCTTCGCTGATTTTGAGGCATGCAAGAGAGAGAGAGAGAGAAAATGAAGTGAAGAGTACTACACAACACAGAGAGAAGAAGAAGAAGAAAAGAAAACCAAGGTGTTTTGAGAAAATGTTGAGCGGGTCATTCCAGAAGGATGAACAGAACATGGGTCACATGACAAACATTGATGTCAATTTGGATAATCATTCTTCTAAGTCTCATGTTTTGGGGCAACACATGAAAAGCCACTCAATTTTCAATGTCCCTTGTCTGTTTGTGGGTCTGGGTCCTAAAAGCTTGTTAGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTTAGCAATCCAGTTAGAACCCCAAGATCAATACTCACCTCTGAGGGTGGGAATCATAGGAGCTGGGATTGCTGCAAAGTAGGTCTAAGCATTATAGATTCATTGGAGGATTGTCCTAAGTTTTCTGGGAAAATTCTAAGGTCATCAGAGAGTAAGAACATTAGTGTCAGTCCTGAAATGATTATCAAAACCCCAAATTGTCAGACCTATATGTATTCTTTTGAGTCATCTAAGTCTTTGCCTAAAGATTTTTGTAAGGCTCCTTATACCAAAAATGGATCTACTTTCCACAAGGATGAATCCAGTGTTCTGTTTGAGATTGGAGAAAGTAGCCTAGATCATGAGCTATTTGGGAAAATCAGGTCTTGTTCATTGGAGTCTTCCAGTCCATTGAAAACCCTTTCTGGATTAACTGATCTAGACACTGATAACAATTTTGCTTTGAAAGATAAAGATAGAACTATTCAAATGAACTCTCCTCATTTTTTTGGAGGAAGTCAGAACTTAAATTCAAACACTCTTTCCATAAGCTCTTCCAATGATTTTATTAAGTCTCTATCAGCTAGTGAGATTGAACTTTCTGAGGACTACACATGTGTTATTTCCCATGGCCCCAATCCCAAAACAACTCATATTTTTGGTGATTGCATTTTGGAGACTCACTCTAATGAATTCAAAAACCATTTTAAGAATGAAGAGAAGGAGGAGGAGGAGGAGAAAGAGAAGGGAGGAGTGACCCTGGTGGATCACACACTGCATACTCCTCACACTCCTATCCAATACCCTTCTAGTGACTTCTTAAGTTTCTGCTACCATTGCAACAAGAAGCTGCTAGAGGGGAAAGATATTTATATTTATAGAGGTGAAAAATCATTTTGCAGCTTAACTTGCCGTGCCATGGAGATCATGAGCGACGAGGAACTTGAGAAATCGAGCACTCTCTCTGAGAAACCTCAAGAGGCAGAACTTGGTGAGCAAATTTTTGAAATAAGCATCCTGACAGCTACATAA 1431 0.3934 MGKVQNQSNSVEREREVVVFQKKLTASLILRHARERERENEVKSTTQHREKKKKKRKPRCFEKMLSGSFQKDEQNMGHMTNIDVNLDNHSSKSHVLGQHMKSHSIFNVPCLFVGLGPKSLLDSDSVRSPTSPLDARVLSNLSNPVRTPRSILTSEGGNHRSWDCCKVGLSIIDSLEDCPKFSGKILRSSESKNISVSPEMIIKTPNCQTYMYSFESSKSLPKDFCKAPYTKNGSTFHKDESSVLFEIGESSLDHELFGKIRSCSLESSSPLKTLSGLTDLDTDNNFALKDKDRTIQMNSPHFFGGSQNLNSNTLSISSSNDFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNEFKNHFKNEEKEEEEEKEKGGVTLVDHTLHTPHTPIQYPSSDFLSFCYHCNKKLLEGKDIYIYRGEKSFCSLTCRAMEIMSDEELEKSSTLSEKPQEAELGEQIFEISILTAT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0259 476 MobiDBLite consensus disorder prediction 35 59 - -
Lal17g0259 476 PANTHER DUF581 FAMILY PROTEIN 67 470 - -
Lal17g0259 476 Coils Coil 362 382 - -
Lal17g0259 476 Pfam zinc-finger of the FCS-type, C2-C2 400 447 IPR007650 -
Lal17g0259 476 ProSiteProfiles Zinc finger FLZ-type profile. 405 449 IPR007650 -
Lal17g0259 476 PANTHER FCS-LIKE ZINC FINGER 11 67 470 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0259 Lal-Chr17 1602916 1605805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0259 - - lang:109328586 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0259 17 1602916 1605805 Lal4g0241 4 1522717 1525224 LSH
Lal25g1079 25 14115914 14117756 Lal17g0259 17 1602916 1605805 PCT
Lal17g0259 17 1602916 1605805 Lal25g1079 25 14115914 14117756 PCT