Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1070 ATGAAGGGAAGTTTCATGTTTCTCTTGGTGCTTTTGTGTGCCACTTTTCATGTCTCCTTCTCCTTAATAGATGGACTAGTAGCAAATGGAAATTTTGAGTTGGGACCAAAGCCATCAGACCTAAAAGGCACGGTGGTGATCGGCGGCCGCCACGCAATACCGGAGTGGGAGATCTCGGGCTATGTTGAGTACATAAAATCAGGTCAAAAACAAGGTGACATGTTACTAGTAGTACCTGAAGGAGCTTATGCTGTGAGACTTGGTAATGAAGCTTCAATTAAGCAAAATATAAAAGTGATTAAGGGAATGTATTATTCTATAACATTTATGGTAGCAAGAACATGTGCACAAGAAGAAAAAATAAATATTTCTGTGGGTTCAGATTATGGAGTTATACCAATACAAACAGTATACAATAGTTATGGTTGGGATCCAATAGCTTATGGATTTAAAGCTGATTATGAAGAAGTGATTATGGTTATACATAACCCTGGAATTGAAGAGGATCCAGCTTGTGGTCCACTCATTGATTCTATTGCTCTAAGAACTCTTTACCCTCCTAGACCAACCAATAAGAACATATTAAAGAATGGTGGGTTTGAAGAAGGACCATATATATTTCCAAACACATCATGGGGTGTTCTAATCCCACCCAACATTGAAGATAATCATTCTCCATTACCAGGTTGGATAGTTGAATCACTAAAAGCAGTGAAATACATAGATTCACAACATTACTCAGTTCCTCAAGGAACAAGAGCAGTGGAACTTGTAGCAGGAAAAGAAAGTGCTATTGCTCAAGTAGCTAGAACTATTCCTGGAAAAACCTATGTACTTTCATTTTCTGTTGGAGATGCTAACAATTCTTGTGAAGGGTCAATGATTGTTGAAGCATTTGCAGGCAAATATACTATTAAAGTGCCCTATGAGTCTAAGGGCAAAGGTGGGTTTAAACGTGCTGCCCTAAAGTTTGTGGCTTTTGGACCAAAAACTAGGATCATGTTCCTTAGTACATTCTACACTATGAGGAGTGATGATTTTTCTTCTTTGTGTGGACCTGTGGTTGATGATGTTAAGTTGCTGAGTCTACGTAAACCATAA 1101 0.3842 MKGSFMFLLVLLCATFHVSFSLIDGLVANGNFELGPKPSDLKGTVVIGGRHAIPEWEISGYVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQNIKVIKGMYYSITFMVARTCAQEEKINISVGSDYGVIPIQTVYNSYGWDPIAYGFKADYEEVIMVIHNPGIEEDPACGPLIDSIALRTLYPPRPTNKNILKNGGFEEGPYIFPNTSWGVLIPPNIEDNHSPLPGWIVESLKAVKYIDSQHYSVPQGTRAVELVAGKESAIAQVARTIPGKTYVLSFSVGDANNSCEGSMIVEAFAGKYTIKVPYESKGKGGFKRAALKFVAFGPKTRIMFLSTFYTMRSDDFSSLCGPVVDDVKLLSLRKP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1070 366 Pfam Protein of unknown function (DUF642) 194 360 IPR006946 -
Lal25g1070 366 Pfam Protein of unknown function (DUF642) 25 181 IPR006946 -
Lal25g1070 366 Gene3D - 189 361 - -
Lal25g1070 366 PANTHER OS02G0527500 PROTEIN-RELATED 6 366 - -
Lal25g1070 366 PANTHER PLANT/F18G18-200 PROTEIN 6 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1070 Lal-Chr25 13966064 13972551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1070 - - gmx:100776765 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1070 25 13966064 13972551 Lal25g1070 25 13966064 13972551 ECH
Lal17g0244 17 1510286 1520196 Lal25g1070 25 13966064 13972551 ECH