Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1044 ATGGCTTCTAACAAGTTATTTTCCACAATTTTAATGCTTTCTCTCCTTTCTTATTCTTCAACATTAACCAATGCATGTGGAACATGCAACCCAGTTAAACCTACACCAACTCCTAGTAAACAAAAGTGCCCAAATGATACATTGAAGCTTGGTGTTTGTGCTAATGTACTAGGACTTGTTAATGTTGTTGTTGGTTCTCCTGCATCAAGTAAATGTTGTGCATTGCTTCAAGGTTTGACAGATTTGGAAGCAGCAATTTGTCTATGTACTGCTATTAAGGCTAATGTTCTTGGGATTAACTTGAATGTTCCTATCTCTCTCACTTTGCTCCTTAGTGCTTGTCAAAAATCTGTCCCTTCTGGTTTCCAATGTGCAGCATAG 381 0.378 MASNKLFSTILMLSLLSYSSTLTNACGTCNPVKPTPTPSKQKCPNDTLKLGVCANVLGLVNVVVGSPASSKCCALLQGLTDLEAAICLCTAIKANVLGINLNVPISLTLLLSACQKSVPSGFQCAA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1044 126 Gene3D - 40 126 IPR036312 -
Lal25g1044 126 CDD HPS_like 41 124 IPR027923 -
Lal25g1044 126 PANTHER LIPID TRANSFER PROTEIN 29 125 - -
Lal25g1044 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 46 124 IPR036312 -
Lal25g1044 126 Pfam Hydrophobic seed protein 43 125 IPR027923 -
Lal25g1044 126 SMART aai_6 43 124 IPR016140 -
Lal25g1044 126 PANTHER - 29 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1044 Lal-Chr25 13816960 13817340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1044 34 124 Acyl Lipid Metabolism Gene Families AT4G22490 42.857 5.19e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1044 - - gmx:100306307 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1044 25 13816960 13817340 Lal25g1044 25 13816960 13817340 ECH
Lal25g1044 25 13816960 13817340 Lal17g0224 17 1400004 1400453 PCT
Lal17g0224 17 1400004 1400453 Lal25g1044 25 13816960 13817340 PCT