Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0224 ATGGCTTCCAACAAACTCATTGGAACCATTATGGTTCTATATCTCTTTGCTTGCTTAACATTCATTGAGGCTAATTGCCCACCCCCAACAACAACACCAACACCAAAGCCAACACCACCTACAACCAAACCTCCTCCTTATGTTCCACCAACACCAACACCACCAACTACTACAACTCCATCACCACCCTCACAAAAATGTCCCAAAGATACCTTAAAGCTAGGAGCATGTGCTGACCTCTTAGGCCTTGTTAATATTATCATTGGAACTCCTCCATCAGGAAATTGTTGTGCATTGATTAATGGGTTGGTTGATTTGGAAGCAGCACTTTGCCTATGCACTGCTATTAAGGCCAATGTGATTGGAATCAACCTGAATGTACCTGTCACTCTCAGCTTGATCCTTAGTGCTTGTCAAAAAAATGTTCCATCTGGTTTCCAATGTCCATAG 450 0.4267 MASNKLIGTIMVLYLFACLTFIEANCPPPTTTPTPKPTPPTTKPPPYVPPTPTPPTTTTPSPPSQKCPKDTLKLGACADLLGLVNIIIGTPPSGNCCALINGLVDLEAALCLCTAIKANVIGINLNVPVTLSLILSACQKNVPSGFQCP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0224 149 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 70 149 IPR036312 -
Lal17g0224 149 Gene3D - 64 149 IPR036312 -
Lal17g0224 149 MobiDBLite consensus disorder prediction 30 62 - -
Lal17g0224 149 CDD HPS_like 65 148 IPR027923 -
Lal17g0224 149 PANTHER LIPID TRANSFER PROTEIN 30 149 - -
Lal17g0224 149 Pfam Hydrophobic seed protein 67 149 IPR027923 -
Lal17g0224 149 SMART aai_6 67 148 IPR016140 -
Lal17g0224 149 PANTHER - 30 149 - -
Lal17g0224 149 MobiDBLite consensus disorder prediction 30 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0224 Lal-Chr17 1400004 1400453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0224 59 149 Acyl Lipid Metabolism Gene Families AT4G22490 37.363 7.10e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0224 - - gmx:100526941 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0224 17 1400004 1400453 Lal17g0224 17 1400004 1400453 ECH
Lal25g1044 25 13816960 13817340 Lal17g0224 17 1400004 1400453 PCT
Lal17g0224 17 1400004 1400453 Lal25g1044 25 13816960 13817340 PCT