Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1029 ATGGCCAATTCTGAATACACGTTAGATTCAGTGAGAAGTGCTTTGATTAGGGAAGAAGATACCATAATTTATGGGCTCATTGAGAGAGCCAAGTTCCCTATGAATTCTCACACTTACACTGAAATCCCATCATTTTCTCCTTCATTGCTTCATTTTCTTGTTATCAATACTGAGTCTCTTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAATGCATTCTTCCCAGAGAATTTACCACCTTCACTCCTCACATCTTACCCCTTCACACAGTTTTTACATGCTGGAACTACTTCCATTAACATAAATAAATCCATCTGGGAATTCTACATTCATGAGTTGCTTCCCTTGTTTGTTGCTGAGGGTGATGATGCCAACTATGCACAAACTGCAGCTACTGATCTTTCATTATTGCAGGCCATATCTAGAAGAATTCATTACGGAAAGTTTGTAGCTGAGGTCAAATTCAGGGAATCTCCTCAAGACTATGAACCTTTAATTCGTGCTAAGGATACAGAAGGATTGATGAAATTATTGACATTTGAGAGTGTTGAAGAAATGGTGAGGAAGAGGGTTGAAAAGAAGGCCAAGCTATATGGACAAGATGTGACCCTCAACAATAGTGATGACAGTAATATAGAAAAATACAAGGTTGATCCATCAGTGGCTTCTACCTTGTACAAGAAATGGTTAATACCTCTCACCAAGGATGTTCAGGTTCAGTACCTCTTGCACCGCCTTGATTGA 750 0.392 MANSEYTLDSVRSALIREEDTIIYGLIERAKFPMNSHTYTEIPSFSPSLLHFLVINTESLQAKAGRYKNPEENAFFPENLPPSLLTSYPFTQFLHAGTTSININKSIWEFYIHELLPLFVAEGDDANYAQTAATDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRAKDTEGLMKLLTFESVEEMVRKRVEKKAKLYGQDVTLNNSDDSNIEKYKVDPSVASTLYKKWLIPLTKDVQVQYLLHRLD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1029 249 PIRSF Chor_mut_AroQ_eu 1 249 IPR008238 GO:0004106|GO:0009073
Lal25g1029 249 SUPERFAMILY Chorismate mutase II 4 249 IPR036263 GO:0046417
Lal25g1029 249 PANTHER CHORISMATE MUTASE 4 249 IPR008238 GO:0004106|GO:0009073
Lal25g1029 249 ProSiteProfiles Chorismate mutase domain profile. 1 249 IPR008238 GO:0004106|GO:0009073
Lal25g1029 249 TIGRFAM CM_pl-yst: chorismate mutase 7 249 IPR008238 GO:0004106|GO:0009073
Lal25g1029 249 PANTHER CHORISMATE MUTASE 4 249 - -
Lal25g1029 249 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 1 249 IPR037039 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1029 Lal-Chr25 13586668 13589332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1029 K01850 - gmx:100791341 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1029 25 13586668 13589332 Lal25g1029 25 13586668 13589332 ECH
Lal25g1029 25 13586668 13589332 Lal10g0038 10 443587 446174 LSH