Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0038 ATGATGGTTTATAGATTTGGGTGGGTATTGGTTCTTATAATTTGTAGTATTGTGAGATGCAGAATGGCAAAAGGTAATTACACATTGGATTCAGTGAGAGATGTTTTGGTTAGGGAAGAAGATAGCATCATATTTGGTCTTATTGAAAGGGCTAAGTTCCCTCTCAACGCTAACACTTATACTCAAAATTACTCTAATATCCCTTCTTTTGGTGCCTCATTGCTCAACTTTGTTGTTATCAATACAGAAGCTGTTCAAGCTAAGGGTGGAAGATACAAAAACCCAGAAGAAAATCCTTTCTTTCCAGAAAAGTTACCACCCTCACTTGTAAAACCTTACCCCTTCACACAGTTTTTGCATGCTGGAGCCTCTTCAATTAACATAAACAAGTGCATCTGGAAATTTTACATTGATAAGCTACTGATTCAGTGGTTTGATTCATTGGGTGATGATGGAAACTATGCACAAACTGCAGCTAGTGACCTTTCATTATTGCAGGCCATTTCTAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGAATCTCCTAAAAAATATGAGCCTCTAATTCGAGCTAAGGATAAAGAAGGATTGATGAAATTGTTGACAGTTAAAAGTGTTGAAGAAATGGTGATAAAAAGAGTTGAAAAGAAGGCAATGGTATATGGAAAGGATGTGACACTTAACAATGATGATAAAAAGAATGAAACAAAATACAAAGTTGATCCATTGGTGGTTTCAACTTTGTACAAGAAATGGTTAATACCTCTTACAAAGGATGCTGAAGTTGAGTACCTCTTGCAGCGTCTAGATTGA 828 0.3623 MMVYRFGWVLVLIICSIVRCRMAKGNYTLDSVRDVLVREEDSIIFGLIERAKFPLNANTYTQNYSNIPSFGASLLNFVVINTEAVQAKGGRYKNPEENPFFPEKLPPSLVKPYPFTQFLHAGASSININKCIWKFYIDKLLIQWFDSLGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPKKYEPLIRAKDKEGLMKLLTVKSVEEMVIKRVEKKAMVYGKDVTLNNDDKKNETKYKVDPLVVSTLYKKWLIPLTKDAEVEYLLQRLD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0038 275 PANTHER CHORISMATE MUTASE 20 275 IPR008238 GO:0004106|GO:0009073
Lal10g0038 275 PANTHER CHORISMATE MUTASE 20 275 - -
Lal10g0038 275 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 275 IPR037039 GO:0004106|GO:0009073
Lal10g0038 275 ProSiteProfiles Chorismate mutase domain profile. 20 275 IPR008238 GO:0004106|GO:0009073
Lal10g0038 275 PIRSF Chor_mut_AroQ_eu 18 275 IPR008238 GO:0004106|GO:0009073
Lal10g0038 275 TIGRFAM CM_pl-yst: chorismate mutase 28 275 IPR008238 GO:0004106|GO:0009073
Lal10g0038 275 SUPERFAMILY Chorismate mutase II 26 275 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0038 Lal-Chr10 443587 446174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0038 K01850 - gmx:100791095 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1029 25 13586668 13589332 Lal10g0038 10 443587 446174 LSH