Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0633 ATGGAGGAGTACAGCAAATCAAGTTCATATGGGAATTACCTCTACCATGGGTCACCTATGCCTCATGATCTTAGGTCCTATAGTCTTTCCCATGCACAAAGTCAAATGGGTTCTAAGGACATGAAGTTGAAGAAAAGAAAAAACATGTTCAAGTGTTGGAGCATTGCTGATCCTGAGTTTCAAAGGAAGAAGAGGATTGCTAACTATAAGTTGTATTCTGTGGAGGACAAGGTAAAAGGTTCCTTCATGAAGAGCTTTACGTGGCTTAAGGCTAAGTACACTGAGATGGTTTATGACTGGTGA 303 0.4059 MEEYSKSSSYGNYLYHGSPMPHDLRSYSLSHAQSQMGSKDMKLKKRKNMFKCWSIADPEFQRKKRIANYKLYSVEDKVKGSFMKSFTWLKAKYTEMVYDW 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0633 100 Pfam Domain of unknown function (DUF3511) 56 98 IPR021899 -
Lal25g0633 100 PANTHER DUF3511 DOMAIN PROTEIN 1 100 - -
Lal25g0633 100 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0633 Lal-Chr25 4873869 4874171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0633 - - tcc:108663167 122.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0633 25 4873869 4874171 Lal17g0156 17 962679 963008 PCT
Lal25g0633 25 4873869 4874171 Lal21g0271 21 1801083 1805584 PCT
Lal25g0633 25 4873869 4874171 Lal4g0169 4 1059215 1059502 PCT
Lal17g0156 17 962679 963008 Lal25g0633 25 4873869 4874171 PCT
Lal21g0271 21 1801083 1805584 Lal25g0633 25 4873869 4874171 PCT
Lal4g0169 4 1059215 1059502 Lal25g0633 25 4873869 4874171 PCT