Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0156 ATGGAAGATTTTCACAGATCAAGGTCTTATGGAAATGGGCAAAACATGGAGATAGAGAACTACTACGGAGCATCCAGGCCACATGATTTCAGGAGCTATAGTACTTCTTATGTACAAACTCAAATGGGTAAGGACTTGAAGTTGAAGAAAGGGAAAAGCATTTCAGGGTCTTTGTCCAAGTCTTGGAGCATAGCTGATCCTGAGATTAGGAGGAAGAAGAGGGTTGTCAGCTATAAAATGTATTCTGTGGAAGGAAAAGTCAAAGGTTCCTTCAGAAAGAGCTTCAGGTGGCTTAAGAATAAATACACACAAGTGGTTTATGGCTGGTAG 330 0.4091 MEDFHRSRSYGNGQNMEIENYYGASRPHDFRSYSTSYVQTQMGKDLKLKKGKSISGSLSKSWSIADPEIRRKKRVVSYKMYSVEGKVKGSFRKSFRWLKNKYTQVVYGW 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0156 109 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 109 - -
Lal17g0156 109 Pfam Domain of unknown function (DUF3511) 65 108 IPR021899 -
Lal17g0156 109 PANTHER DUF3511 DOMAIN PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0156 Lal-Chr17 962679 963008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0156 - - cpap:110824289 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0156 17 962679 963008 Lal21g0271 21 1801083 1805584 LSH
Lal17g0156 17 962679 963008 Lal4g0169 4 1059215 1059502 LSH
Lal25g0633 25 4873869 4874171 Lal17g0156 17 962679 963008 PCT
Lal17g0156 17 962679 963008 Lal25g0633 25 4873869 4874171 PCT