Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0631 ATGCAAGGCCTACACCGTTGCTCAAACGACGTCGTTCACTTCAACCTCACCACCACCACTCCAAACACCACCACCACCACCACCACCACCACCACCACCACCACTTCCTTCTCCATCGACGTAGACGAATCAACGGAGGAACGAATCCAACGCCTCATATCAGAACACCCTGTCATAATCTTCACCCAATCCTCTTGCTGCATGTGTCATGTCATGAAGAAGCTTCTCGCCACTATCGGAGTCAACCCTACAGTTATTGAATTAGACCACAACGAGATCGCTTCTCTTCCCACTTCCGGTGACGCCGAACACCATACCACCACCACTTCCACCGCCCACTGCAGCCTTACTCCCGCCGTCTTCATAGGTGGTACCTGCATCGGCGGCCTTGAGTCCCTTGTAGCTCTCCACGTCAGCGGTCACCTTGTTCCCAAGCTTGTAGAAGTAGGTGCTCTCTGGGCATGA 465 0.5376 MQGLHRCSNDVVHFNLTTTTPNTTTTTTTTTTTTTSFSIDVDESTEERIQRLISEHPVIIFTQSSCCMCHVMKKLLATIGVNPTVIELDHNEIASLPTSGDAEHHTTTTSTAHCSLTPAVFIGGTCIGGLESLVALHVSGHLVPKLVEVGALWA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0631 154 PANTHER GLUTAREDOXIN-C6 11 153 - -
Lal25g0631 154 TIGRFAM GlrX-like_plant: glutaredoxin-like family 49 154 IPR011905 -
Lal25g0631 154 SUPERFAMILY Thioredoxin-like 44 153 IPR036249 -
Lal25g0631 154 ProSiteProfiles Glutaredoxin domain profile. 46 153 - -
Lal25g0631 154 Pfam Glutaredoxin 58 127 IPR002109 -
Lal25g0631 154 PANTHER GLUTAREDOXIN 11 153 IPR011905 -
Lal25g0631 154 Gene3D Glutaredoxin 39 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0631 Lal-Chr25 4860359 4860823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0631 47 153 Miscellaneous Gene Families AT4G15700 42.593 3.20e-24 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0631 - - adu:107495514 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0631 25 4860359 4860823 Lal25g0631 25 4860359 4860823 ECH
Lal8g0837 8 6078206 6078601 Lal25g0631 25 4860359 4860823 LSH
Lal25g0631 25 4860359 4860823 Lal17g0153 17 945199 945588 PCT
Lal17g0153 17 945199 945588 Lal25g0631 25 4860359 4860823 PCT