Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0153 ATGCAAAGCGTTGGGTGTTGCCTAACAACCACCATGACCAACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCCTCTTTATCCATGGATCTAGATGATTCTCCTGAAACCCGAATCCAACGCCTCATAACAGAAAACCCTGTTATCATCTTCACACGATCCTCTTGCTGCATGTGCCACGTCATGAAGAATCTCCTCTCCACTATCGGCGTTAGTCCCACCGTCATCCAGCTTGATGACCACGAAATCGCCGCCCTCCCTTCCTCCACCACTCCCGCTCCAGCCGCCTTCATCGGAGGCACTTGCATCGGTGGACTCGACTCCCTCGTCTCCCTCCACGTCACCGGCCACCTTGTCCCTAAGCTCCTTCAAGTTGGTGCTCTTTCTGTATGA 390 0.5205 MQSVGCCLTTTMTNSFSSSSSSSSSLSMDLDDSPETRIQRLITENPVIIFTRSSCCMCHVMKNLLSTIGVSPTVIQLDDHEIAALPSSTTPAPAAFIGGTCIGGLDSLVSLHVTGHLVPKLLQVGALSV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0153 129 ProSiteProfiles Glutaredoxin domain profile. 35 128 - -
Lal17g0153 129 PANTHER GLUTAREDOXIN 18 128 IPR011905 -
Lal17g0153 129 Pfam Glutaredoxin 47 83 IPR002109 -
Lal17g0153 129 CDD GRX_GRXh_1_2_like 46 120 - -
Lal17g0153 129 SUPERFAMILY Thioredoxin-like 36 126 IPR036249 -
Lal17g0153 129 PANTHER GLUTAREDOXIN-C6 18 128 - -
Lal17g0153 129 Gene3D Glutaredoxin 29 129 - -
Lal17g0153 129 TIGRFAM GlrX-like_plant: glutaredoxin-like family 38 128 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0153 Lal-Chr17 945199 945588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0153 38 127 Miscellaneous Gene Families AT4G15700 41.837 5.62e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0153 - K03676 gmx:100791969 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0837 8 6078206 6078601 Lal17g0153 17 945199 945588 PCT
Lal25g0631 25 4860359 4860823 Lal17g0153 17 945199 945588 PCT
Lal17g0153 17 945199 945588 Lal8g0837 8 6078206 6078601 PCT
Lal17g0153 17 945199 945588 Lal25g0631 25 4860359 4860823 PCT