Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0269 ATGGATGGAAGTGATATATACAGAGCAAGTAATAGTTTACGAGCTAGAAGTTCCACAGTGTGGAGAGATAGTGGAGTTGAAGTATTCTCAAAATCAACACGAGAAGAAGATGATGAAGAAGCTCTTAAATGGGCTGCACTTGAAAAGTTACCAACTTATAATCGTTTAAGGAAAGGGTTGTTAACAACTTCACATGGACCTGCAAGTGAAATCGTTGTCACTGATCTTGCTCATCAAGAAAGACAGAAACTTCTTGATAGGTTGGTAAAAGTTGCTGAAGAAGACAATGAAAAGTTCTTGTTGAAGCTCAGAGAGAGAGTTGATAGAGTTGGGCTTGATATTCCAACAATTGAAGTTCGATATGAGCACATGAAAATTGAGGCAGAGGCTTTTGTGGGAGGTAGAGCTTTACCATCATTCATCAACTCTGCTACTAATGTAATAGAGGGTTTGTTGAATCTTCTCCATATCGTTCCAACAAAAAAGAAACATGTGACTATTCTTAAGGATGTTAGTGGTATCATCAAACCTCGTAGGATGACACTGCTTCTGGGTCCTCCTGGTTCAGGAAAGACCACACTATTGTTGGCCTTATCAGGAAAGCTTGATCCAAGTCTTCAGGTAACTGGGAAAGTGACATATAATGGGCATGAAATGAATGAGTTTGTTCCTCAGAGAACTGCTGCATATATCAGCCAACATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACCTTGGCCTTCTCGGCAAGGTGCCAAGGAGTCGGATCACGATATGACATGCTATCTGAGTTGTCTAGAAGAGAAAAGGCAGCAAATATCAAACCTGACCCTGATATCGATGTCTACATGAAGGCAACTGCAACTGCAGGGCAGGAATCAAGCATAGTAACAGATTATATATTAAAGATTTTGGGGTTGGATATATGTGCTGATACTATGGTGGGAGATGAAATGTTGCGTGGTATCTCGGGAGGACAACGGAAACGTGTTACCACTGGAGAGATGTTGGTTGGACCAGCGAATGCACTTTTCATGGATGAAATATCAACAGGGTTGGACAGTTCCACAACTTTTCAGATTGTGAGCTCTCTGAGGCAATATGTTCACATTCTTAATGGAACCGCGGTTATATCTTTGCTCCAGCCAGCACCTGAGACTTATGATCTTTTCGATGACATTATCTTAATCTCTGATGGCTATGTTGTGTACCACGGACCTCGTGAATATGTTCTAGACTTTTTCGAATCTATGGGATTCAAATGTCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAGTAACTTCGAGAAAGGATCAAGCTCAGTATTGGGTCCGCAAAGATCAACCATACAGATTTGTTAACGAGGTTCAATTTGCCGAGGCATTTCAATCCTTCCATATGGGTAGGAAACTTGGAGATGAACTTGCAGTTCCATTTGACAAGTCTAAGAACCATCCAGCTGCATTAACCACTGAGAAGTATGGTATTAACAAAACGGAGCTGTTAAAGGCTAACCTTTCAAGAGAGTATTTGCTTATGAAAAGGAACTCATTTGTTTACATCTTCAAGCTATGCCAGATTTTTGTCATGGCATTCATAGCATTTACGCTATTTTTTCGAACTGAGATGCATCACCGCAATGTAGCTGATGCTGGTGTTTACACTGGTGCTCTCTTTTTCACATTAGTCACAATTATGTTTAATGGAATGGCTGAGATTTCTATGACCATTGCCAAGCTTCCGGTTTTCTACAAGCAACGGGATCTTCTGTTTTATCCCTCATGGGCATATGCTATTCCTTCATGGATTCTCAAGATTCCTGTTACAATGGCTGAAGTTGCTGTTTGGGTATTTCTCACATACTATGTTATTGGATTTGATCCAAATGTTGGGAGGTTCTTCAAGCAGTACCTTGTGCTATTCTTTCTCAGCCAGATGGCTTCGGGATTATTCCGAGCTATTGCAGCATTGGGTAGAAACATGATTGTGGCTAACACATTTGGATCCTTTGCAGTTCTAACATTTCTTTCATTGGGTGGCTTTGTTATATCAAAAAAGGATATCAAGAGCTGGTGGATTTGGGGTTACTGGATCTCACCTCTCATGTATGGGCAGAATGCCTTAATGGTCAATGAATTTCTTGGGAACAGTTGGCACAATTCTACTCACAATATAGGAGTTGATCTTCTGGAGAGCCGTGGCTTCTTCACACGATCATATTGGTATTGGATAGGCTTTGGAGCATTGGTTGGGTTTGTGTTCCTTTTCAACATGCTGTTTGGTGTTGCTCTCGAATGGCTCGGCCGTGATTATGCAATACTTTTTTTTACTGAAAAGAATTCTTCTGAATATGCAGCCTTCGATAAGCCACAAGCAACAATATCTGAAGAACCAGAAGAAACTACAGAAGTCGCACAAGAAGTCGAACTGCCACGCATAGAAAGTTCAGGAAGAGGTGATGTTGTTGAGGGATCCAGCCATGGAAAGAAAAAAGGAATGGTGCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAATCACATATTCTGTTGACATGCCACAAGAAATGAAGGAACAAGGTGTACAAGAGGACAAATTGGTGCTTCTGAATGGGGTTAGTGGTGCATTCAGGCCTGGAGTTCTCACAGCTTTGATGGGTGTAAGTGGAGCTGGTAAAACTACTTTGATGGATGTTCTCGCTGGTAGGAAAACCGGTGGTTATATTGATGGAAGCATAAAAATTTCTGGATACCCGAAAAAACAAGAAACATTTGCTAGAATCTCTGGCTATTGTGAGCAGAATGATATCCACTCACCTCATGTTACAGTTTATGAATCTTTGCTCTATTCTGCATGGCTCCGTTTATCCTCTTCAGTTGATTCCAAAACGAGAAAGATGTTCATCGAGGAAGTTATGGAACTTGTGGAGCTGAAGCCATTGAGGAATTCACTGGTTGGATTGCCTGGTGTCAGCGGTCTTTCAACCGAACAACGCAAAAGGCTTACCATTGCAGTTGAATTAGTGGCTAACCCTTCCATAATATTCATGGATGAACCTACTTCAGGATTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTCAGGAACACAGTGGATACAGGAAGAACAGTTGTTTGCACCATCCATCAGCCTAGCATCGACATATTCGAAGCTTTTGATGAGCTATTCCTAATGAAGCGTGGAGGACGAGAAATTTATGTTGGGCCACTCGGCCGTCACTCTACCCATTTGATCAAGTATTTCGAGAGCATTGAAGGGGTGAGTAAAATCAAAGACGGGTATAACCCTGCAACTTGGATGTTGGAAGTTACAAGTACAGCACAAGAACTTAACTTAGGTGTTGATTTTACTGAGATATACCAAAATTCTGATCTGTATAGGAGAAACAAACAGCTTATACAAGAACTGAACCAACCTGCTCCTGGTTCAAAGGACTTATATTTCCCTACTCAATTCTCTCAGTCATTCTTGGTCCAATGCCAAGCCTGCTTGTGGAAACAGCGTTGGTCATATTGGCGCAACCCACCATACACTGCTGTGAGGTTTTTCTTCACTACTTTCATAGCCTTGATGTTTGGAACAATGTTCTGGGACATCGGAACCAAAACCGCAAACATGCAAGACTTATTAAATGCGGTCGGTTCGATGTATTCCGCTGTTCTCTTCCTTGGAGTGCAGAATTCTGCATCAGTACAGCCAGTGGTTGCAGTTGAAAGAACTGTCTTTTATAGAGAAAAAGCTGCTGGAATGTATTCTGCCTTACCCTATGCATTTTCACAGATTCTAGTGGAGCTACCTTATATTTTTGCTCAAGCCGTGACGTATGATCTCATAGTCTATGCCATGATTGGATTTGAATGGACTGTAGCGAAATTCTTTTGGTCTCTATTCTTCATGTACTTCACATTGTGCTACTTTACCTTCTACGGTATGATGGCAGTCGCAGTTACACCGAATCACCATGTTGCTTCCATTGTGGCTGCTGCATTTTATGCAGTTTGGAATCTATTCTCAGGATTTGTTGTCACCAGACCCAATATTCCTGTTTGGTGGAGATGGTACTACTGGGCATGTCCTGTGGCCTGGACCATATATGGATTGATTGCATCACAATTTGGAGATATACAAGACTTTATGGAATCCGAGCAGAAGTCGGTGAAAGATTTCGTAGAAAGCTATTTCGGTATCAAACATGACTTCATAGGAGTTACTGCGGTTGTGGTTCCTGGGATCGCCGTGCTCTTTGCATTTATTTTTGCTGTTGGTATCAAGGTCTTTAACTTCCAAAAGAGATAG 4332 0.4153 MDGSDIYRASNSLRARSSTVWRDSGVEVFSKSTREEDDEEALKWAALEKLPTYNRLRKGLLTTSHGPASEIVVTDLAHQERQKLLDRLVKVAEEDNEKFLLKLRERVDRVGLDIPTIEVRYEHMKIEAEAFVGGRALPSFINSATNVIEGLLNLLHIVPTKKKHVTILKDVSGIIKPRRMTLLLGPPGSGKTTLLLALSGKLDPSLQVTGKVTYNGHEMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLSELSRREKAANIKPDPDIDVYMKATATAGQESSIVTDYILKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHILNGTAVISLLQPAPETYDLFDDIILISDGYVVYHGPREYVLDFFESMGFKCPERKGVADFLQEVTSRKDQAQYWVRKDQPYRFVNEVQFAEAFQSFHMGRKLGDELAVPFDKSKNHPAALTTEKYGINKTELLKANLSREYLLMKRNSFVYIFKLCQIFVMAFIAFTLFFRTEMHHRNVADAGVYTGALFFTLVTIMFNGMAEISMTIAKLPVFYKQRDLLFYPSWAYAIPSWILKIPVTMAEVAVWVFLTYYVIGFDPNVGRFFKQYLVLFFLSQMASGLFRAIAALGRNMIVANTFGSFAVLTFLSLGGFVISKKDIKSWWIWGYWISPLMYGQNALMVNEFLGNSWHNSTHNIGVDLLESRGFFTRSYWYWIGFGALVGFVFLFNMLFGVALEWLGRDYAILFFTEKNSSEYAAFDKPQATISEEPEETTEVAQEVELPRIESSGRGDVVEGSSHGKKKGMVLPFEPHSITFDEITYSVDMPQEMKEQGVQEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSSSVDSKTRKMFIEEVMELVELKPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREIYVGPLGRHSTHLIKYFESIEGVSKIKDGYNPATWMLEVTSTAQELNLGVDFTEIYQNSDLYRRNKQLIQELNQPAPGSKDLYFPTQFSQSFLVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIALMFGTMFWDIGTKTANMQDLLNAVGSMYSAVLFLGVQNSASVQPVVAVERTVFYREKAAGMYSALPYAFSQILVELPYIFAQAVTYDLIVYAMIGFEWTVAKFFWSLFFMYFTLCYFTFYGMMAVAVTPNHHVASIVAAAFYAVWNLFSGFVVTRPNIPVWWRWYYWACPVAWTIYGLIASQFGDIQDFMESEQKSVKDFVESYFGIKHDFIGVTAVVVPGIAVLFAFIFAVGIKVFNFQKR 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0269 1443 Gene3D - 841 1090 IPR027417 -
Lal25g0269 1443 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1443 - -
Lal25g0269 1443 Pfam ABC transporter 873 1025 IPR003439 GO:0005524
Lal25g0269 1443 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Lal25g0269 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1097 IPR003439 GO:0005524
Lal25g0269 1443 Pfam ABC-2 type transporter 383 436 IPR043926 GO:0140359
Lal25g0269 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Lal25g0269 1443 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1443 - -
Lal25g0269 1443 CDD ABCG_PDR_domain2 842 1080 IPR034003 -
Lal25g0269 1443 Gene3D - 153 463 IPR027417 -
Lal25g0269 1443 CDD ABCG_PDR_domain1 150 407 IPR034001 -
Lal25g0269 1443 Pfam ABC-2 type transporter 1171 1384 IPR013525 GO:0016020|GO:0140359
Lal25g0269 1443 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Lal25g0269 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Lal25g0269 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 1082 IPR027417 -
Lal25g0269 1443 Pfam Plant PDR ABC transporter associated 722 770 IPR013581 -
Lal25g0269 1443 SMART AAA_5 177 410 IPR003593 -
Lal25g0269 1443 SMART AAA_5 882 1074 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0269 Lal-Chr25 1828091 1835328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0269 K08711 - gmx:100793825 2528.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0269 25 1828091 1835328 Lal18g0195 18 1606413 1614347 PCT
Lal18g0195 18 1606413 1614347 Lal25g0269 25 1828091 1835328 PCT