Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0195 ATGGAGGGAAGTGATGTATATAGAGCAAGCAATAGTTTAAGAGTTAATAGTTCTACAGTTTGGAGAAACAGTGCAATGGAGGTTTTCTCAAAGTCCTCACGTGAAGAAAATGATGAAGAGGCTCTTAAATGGGCTGCACTTGAAAAACTTCCAACTTATAACCGTTTAAGGAAAGGGTTGTTGACCACATCATGTGGTGTTTCCAATGAGATTGATGTCACTGATATTGGCTTTCAAGAAAGACAGAAGCTTCTAGACAGGTTGGTTAAGGTTGCTGAAGAGGACAATGAAAGGTTTTTGTTGAAGCTCAAGAAAAGAATTGATAGAGTTGGGATTGATATTCCAACCATTGAAGTTCGATTTCAGCATCTAAATGTTGAAGCAGAGGCTTATGTAGAAAGTAGATCTTTGCCTAGTTTACTGAACTTTGCTACTAATATGGTGGAGAGTTTCTTTACTTCTCTCCATATTCTCAAAAGCAAAAAGAAACATATGACTATTCTTAAAAATGTCAGTGGAATCATCAAACCTCGTAGGATGACATTGCTATTAGGTCCTCCAAGTTCAGGAAAGACCACACTCCTTTTAGCCCTGTCAGGAAAGCTTGATCCAAATCTTAAGGTATCTGGGAGAGTGACTTATAATGGATATGGAATGGATGAGTTTGTACCTCAAAGAACTGCAGCCTACATAAGCCAGCATGATGTTCACATAGGAGAAATGACTGTAAGAGAAACCTTGGCTTTCTCAGCAAGGTGCCAAGGCGTTGGAACACGCTACGACTTATTATCCGAGTTGTCTAGAAGAGAGATAGAAGCAAAGATTAAGCCTGATCCAGATATTGATGTCTATATGAAGGCAACTGCAGCTATAGGCCAGGAGGAAAGCTTGGTAACAGATTATGCACTAAAGATTCTAGGATTGGATATATGTGCTGATACTTTGGTAGGGGATGAAATGTTGCGCGGTATTTCTGGAGGGCAAAGGAAGAGGGTTACTACAGGGGAGATGTTGGTTGGACCGGCAAATGCTTTATTCATGGATGAAATATCTACTGGCTTGGACAGTTCCACAACTTTTCAGATTGTGAGCTCTCTCAGACAATATGTTCACATTCTTAACGGAACCGCGGTTATCTCTTTGCTCCAGCCAGCACCAGAGACTTATGAACTTTTTGATGACATCATTCTTATTTCTGATGGTAAAATTGTCTACCAAGGACCCTGTGAATATGTTCTTGACTTCTTTGAATCTATGGGGTTTAAATGTCCTGAAAGGAAAGGTGTTGCTGATTTCCTTCAAGAAGTAACTTCAGTAAAGGATCAAGAGCAGTATTGGACACAAAGAGATATACCATACAGGTTTATAACTGTTAATGAATTTGCTGAGGCATTTCAATCTTTCCACATCGGTAGAAGAATCGGAGATGAACTTGCAGTTCCATTTGACAAGTCCAGAAACCACCCAGCTGCATTAACCACTAACAAGTATGGTGTTAACAAGAAGGAGTTGTTAAAGGCTAACTTCTCAAGAGAGTATTTGCTTATGAAAAGGAACTCATTTGTTTACATCTTCAAGATATGCCAACTTACTACCATGGCATTAATCGCGATGACACTATTTCTACGAACCGAGATGCACCGAGATTCACTAAGTGATGGAGGAGTTTATGCTGGTGCTCTATTTTTCACAGTAGTGATGATTATGTTTAATGGAATGGCTGAGCTTTCAATGACCATTGCAAAGTTACCTATTTTCTACAAGCAAAGGGACCTTCTATTCTATCCCTCATGGGCATATGCCATTCCTTCATGGATCCTTAAGATCCCTATTGCACTTATAGAAGTTGCTGTTTGGGTATTTCTCACCTATTATGTGATTGGATTTGATCCAAATGTTGGAAGATTATTAAAGCAGTACATTCTGCTAGTACTAATAAACCAAATGGCTTCTGGATTGTTCCGAGCAATCGCAGCACTGGGTAGGAACATAATTGTGGCTAGCACATTTGGGTCCTTTGCACTTCTCACATTCCTTGCATTAGGTGGCTTCGTTCTGTCAAAAAAGGATATCAAGGGGTGGTGGATTTGGGGTTACTGGATTTCACCTTTAATGTATGGCCAGAATGCTATTGTGGTGAATGAGTTCCTTGGAAATAGTTGGAACCGATTAACTCCAACTTCAAATAAGACTATTGGAGTTCAAATTTTGGAGTCTCGCGGTTTCTTCACACAAGCATATTGGTATTGGATTGGGTTTGGGGCATTGATTGGATTTATGATCCTTTTCAACATTCTGTACACTGTGGCTCTCACTTACCTCAACCCATTTGATACGCCGCAGGCAATGATGACTCAAGAATCAGAAGGCCAAGAGGTTGAATTACCATTCAAAGGAAATTCAGGAAGAGCTAATGCTGTTATGGATTCTAGCCATGGAAAGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCTCTCACATTTGATCAAATTGTATACTCAGTTGACATGCCTCAAGAAATGAAGGATCAGGGTGCAATAGAGGACAGGTTAGTGCTTCTGAAAGGTGTTAGTGGTGCATTTAGGCCTGGTGTTCTCACAGCTTTGATGGGTGTGAGTGGAGCTGGTAAAACTACTTTGATGGATGTTTTGGCTGGTAGAAAAACTGGTGGGTATATTGAAGGGAGCGTTAAAGTTTCTGGCTACCCTAAAAAGCAAGAAACGTTTGCTCGAATATCAGGTTACTGTGAGCAGAACGATATACATTCTCCTCATGTTACTGTCTATGAGTCCTTGGTCTACTCAGCATGGCTTCGTTTACCAGCAGAAGTTGATACCAATGCAAGAAAGATGTTTATTGAGGAAGTCATGGAACTTGTTGAGCTAAACCAATTGAGGAACTCATTGGTTGGTTTGCCTGGTGTAAGTGGTCTCTCAACCGAGCAACGCAAGAGGCTAACCATTGCGGTTGAGTTAGTGGCTAATCCATCCATAATCTTCATGGATGAGCCTACTTCTGGCTTAGATGCTAGAGCTGCCGCAATTGTTATGAGAACTGTTAGGAACACAGTTGACACAGGAAGAACTGTTGTTTGCACCATCCATCAGCCAAGCATTGACATATTTGAAGCTTTTGATGAGTTATTCCTAATGAAGCGTGGCGGACAAGAAATATATGTTGGGTCACTCGGTCGCCATTCTAGCCAACTGATCAACTATTTTGAGAGCATTGACGGGGTTAGTAAAATTAAAGATGGCTATAATCCAGCGACTTGGATGTTGGAAGTAACAACTTCAGCACAAGAACATAACTTAGGTGTTGATTTTCATGAGATATACAAAAATTCTGAACTGTATAGGAGAAACAAGCAGGTTATAGCAGAACTTAGCAACCTTGCTCCTGGTTCAAAGGATCTTTATTTTGCTACTCAATACTCACAGTCACTTTTGGTTCAATGCCTGGCTTGCCTATGGAAACAACATTGGTCGTATTGGCGCAATCCACCATATACTGCAGTGAGGCTTCTCTTCACTACTTTCATAGCCCTCATGTTTGGAACAATGTTCTGGAATCTCGGAGGAAAAATATCAAACAGACAAGACCTTTTTAATGCCGTAGGCTCGATGCATACCGCTGTTCTCTTCCTCGGGGTCCAGAATTCTGCCTCTGTACAGCCAGTTGTAGCAGTTGAAAGAACTGTGTTTTATAGAGAAAGAGCTGCTGGAATGTATTCCGCCTTACCCTACGCAATTGCGCAGGTTATAATAGAGCTACCTTATGTTTTTGCCCAAGCTGTTACATATGGTGTCATAGTTTATTCCATGATTGGATTTGAGTGGACTCTAGAGAAATTCTTTTGGTACATATTTTTCATGTATTTCACATTATGCTACTTCACTTTCTATGGCATGATGGCTGTGGCTGTGACACCAAATCACCATGTTGCTTCTATTGTGGCTGCTGCATTTTATGCAATTTGGAACCTCTTTTCAGGATTTGTCGTCCCACGACCCAGGATTCCTGTGTGGTGGAGGTGGTACTATTGGGCATGTCCTGTGGCTTGGACAATATATGGATTGGTTGCATCACAATTTGGAGATATAACAACAGTGATGAAATCAGAAGATATGTCAGTGCAAGAGTTCTTAAGAAGTTATTTCGGTATCAAACATGACTTCATAGGAGTTTGTGCAATTGTGGTTTCTGGAACTGCTATTCTCTTTGCATTTACATTTGCTGTCTCAATCAAGGTCTTCAACTTCCAGAAGAGATAG 4278 0.4063 MEGSDVYRASNSLRVNSSTVWRNSAMEVFSKSSREENDEEALKWAALEKLPTYNRLRKGLLTTSCGVSNEIDVTDIGFQERQKLLDRLVKVAEEDNERFLLKLKKRIDRVGIDIPTIEVRFQHLNVEAEAYVESRSLPSLLNFATNMVESFFTSLHILKSKKKHMTILKNVSGIIKPRRMTLLLGPPSSGKTTLLLALSGKLDPNLKVSGRVTYNGYGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGTRYDLLSELSRREIEAKIKPDPDIDVYMKATAAIGQEESLVTDYALKILGLDICADTLVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHILNGTAVISLLQPAPETYELFDDIILISDGKIVYQGPCEYVLDFFESMGFKCPERKGVADFLQEVTSVKDQEQYWTQRDIPYRFITVNEFAEAFQSFHIGRRIGDELAVPFDKSRNHPAALTTNKYGVNKKELLKANFSREYLLMKRNSFVYIFKICQLTTMALIAMTLFLRTEMHRDSLSDGGVYAGALFFTVVMIMFNGMAELSMTIAKLPIFYKQRDLLFYPSWAYAIPSWILKIPIALIEVAVWVFLTYYVIGFDPNVGRLLKQYILLVLINQMASGLFRAIAALGRNIIVASTFGSFALLTFLALGGFVLSKKDIKGWWIWGYWISPLMYGQNAIVVNEFLGNSWNRLTPTSNKTIGVQILESRGFFTQAYWYWIGFGALIGFMILFNILYTVALTYLNPFDTPQAMMTQESEGQEVELPFKGNSGRANAVMDSSHGKKRGMVLPFEPHSLTFDQIVYSVDMPQEMKDQGAIEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSVKVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPAEVDTNARKMFIEEVMELVELNQLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGSLGRHSSQLINYFESIDGVSKIKDGYNPATWMLEVTTSAQEHNLGVDFHEIYKNSELYRRNKQVIAELSNLAPGSKDLYFATQYSQSLLVQCLACLWKQHWSYWRNPPYTAVRLLFTTFIALMFGTMFWNLGGKISNRQDLFNAVGSMHTAVLFLGVQNSASVQPVVAVERTVFYRERAAGMYSALPYAIAQVIIELPYVFAQAVTYGVIVYSMIGFEWTLEKFFWYIFFMYFTLCYFTFYGMMAVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPRIPVWWRWYYWACPVAWTIYGLVASQFGDITTVMKSEDMSVQEFLRSYFGIKHDFIGVCAIVVSGTAILFAFTFAVSIKVFNFQKR 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0195 1425 Pfam ABC-transporter N-terminal 81 143 IPR029481 -
Lal18g0195 1425 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1425 - -
Lal18g0195 1425 Gene3D - 153 454 IPR027417 -
Lal18g0195 1425 Gene3D - 844 1072 IPR027417 -
Lal18g0195 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Lal18g0195 1425 SMART AAA_5 864 1056 IPR003593 -
Lal18g0195 1425 SMART AAA_5 177 402 IPR003593 -
Lal18g0195 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 827 1079 IPR003439 GO:0005524
Lal18g0195 1425 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Lal18g0195 1425 Pfam ABC-2 type transporter 1153 1366 IPR013525 GO:0016020|GO:0140359
Lal18g0195 1425 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1425 - -
Lal18g0195 1425 Pfam ABC-2 type transporter 383 462 IPR043926 GO:0140359
Lal18g0195 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Lal18g0195 1425 CDD ABCG_PDR_domain2 824 1062 IPR034003 -
Lal18g0195 1425 CDD ABCG_PDR_domain1 155 407 IPR034001 -
Lal18g0195 1425 Pfam Plant PDR ABC transporter associated 721 783 IPR013581 -
Lal18g0195 1425 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Lal18g0195 1425 Pfam ABC transporter 855 1007 IPR003439 GO:0005524
Lal18g0195 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 850 1063 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0195 Lal-Chr18 1606413 1614347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0195 K08711 - gmx:100783377 2469.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0269 25 1828091 1835328 Lal18g0195 18 1606413 1614347 PCT
Lal18g0195 18 1606413 1614347 Lal25g0269 25 1828091 1835328 PCT