Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0252 ATGCTTGGGTTTGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAACAATTCTTGCAGCTTCAGCAACTGCAAGATGATACCTCACCCAACTTTGTCTCTGAAGTTGTCAACATTTATTTTCAAGAATCCGAGAAGCTACTCACCAATCTTCGACAATTGCTAATGGAGAGGGAATTTTGTGACTACAAGAAAATGGGAATTCATTTGAATCAAATGATGGGAAGTAGTTCGAGCATTGGTGCCAAGAGACTCACAAATGTATGCGTTGCATTTCGTGCCTCTGCTGACCAAAACAATCGTGCTGGATGCTTGCGTGCTTTGGAGATGTTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCACGAACTATTCCAAATGGAGCAGCAACGTGCTTTGGCAGAAGGAGTGAGATACCCAGTGAACAATCAATAA 474 0.443 MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDDTSPNFVSEVVNIYFQESEKLLTNLRQLLMEREFCDYKKMGIHLNQMMGSSSSIGAKRLTNVCVAFRASADQNNRAGCLRALEMLEHEYCYLKNKLHELFQMEQQRALAEGVRYPVNNQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0252 157 Gene3D HPT domain 5 156 IPR036641 GO:0000160
Lal25g0252 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Lal25g0252 157 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lal25g0252 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Lal25g0252 157 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Lal25g0252 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0252 Lal-Chr25 1729539 1731130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0252 K14490 - gmx:100789608 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0252 25 1729539 1731130 Lal25g0252 25 1729539 1731130 ECH
Lal25g0252 25 1729539 1731130 Lal1g1254 1 13810289 13812597 PCT
Lal1g1254 1 13810289 13812597 Lal25g0252 25 1729539 1731130 PCT