Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1254 ATGCTTGGGTTAGGTGCAGACCTCTTGTGGGTCGACATGAACCGTCTTCTCTCATTCCTCTTCCATCAGGGAGTGTTGGATGAACAATTCTTGCAGCTTCAACAGCTTCAAGATGAAACATCTCCTAACTTTGTCACTGAGGTTGTTAACATTTATTTTCATGAGTCTGAGAAGCTTCTCAAGAATCTCAGAGAATTGTTGATGGAAAAGGAGTTATCAGAGTACAAGAGAATAGGAATGCATTTGAATCAGTTCATTGGAAGCAGTTCCAGCATTGGCGCTAAGAGAGTTACAAATGTTTGCATTGCATTTCGAGCCGCTACTGATCAGAACAACCGTCCTGGATGCTTGCGAGCGTTGGAGATGTTAGAACATGAATATTGCTATCTCAAGAACAAGTTACATGAACTATTCCAAATAGAGCAGCAACGTGCTTTGGCAGCAAGAGTGAGGTACCCAATGCAGAATCAATAA 474 0.4198 MLGLGADLLWVDMNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVTEVVNIYFHESEKLLKNLRELLMEKELSEYKRIGMHLNQFIGSSSSIGAKRVTNVCIAFRAATDQNNRPGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAARVRYPMQNQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1254 157 PANTHER - 1 151 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lal1g1254 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Lal1g1254 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 151 - -
Lal1g1254 157 Gene3D HPT domain 6 156 IPR036641 GO:0000160
Lal1g1254 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 12 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1254 Lal-Chr1 13810289 13812597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1254 K14490 - gmx:100777831 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1254 1 13810289 13812597 Lal1g1254 1 13810289 13812597 ECH
Lal25g0252 25 1729539 1731130 Lal1g1254 1 13810289 13812597 PCT
Lal1g1254 1 13810289 13812597 Lal25g0252 25 1729539 1731130 PCT