Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0223 ATGAGAGACATAATTTCATGTTTCAGCGAAAATGCAGTGAATGTGACACCACATTCTTCATGTTCAAGCTTTTCAAGCAAGGCTTTTATCTCTCCAAACCTTACTCCTTCAACCCAAAATTCAGTGTCTTATGTCTACAAAGCAATTCTTCCCAATAATCAAAAGCACTTTTTTATCACAGTGACATGGAGTATGAGTCACTCAAATCAAGGACTCACCATAAGCTTGGGTGAAGAAGAAACAATTTTCAGACTTAATACTAATTCAAGGTTTTTCAGGAAGAAAGGGAGCAAATTGCTTGAATCTGATGAGTTAAAGATTGAAATATTCTGGGATTTTTACAATGCTAAATATGATACTGGTCCTGAACCTGTTAATGATTTTTTTGTTGCAATTCTTATTGATGCAGAAGTAGTCCTTATTCTTGGTGAAGTAACTATGACCAAAAAGTTCAAAACTAGAAGAATCCCTTTAGCCAAAGTCTCGCTATTGTCAAGAAGAGAGCATTGTTCAGGTAACACAATATACAAAACAAAGACTCAGTTCTGTGAAAATGGAACTTTGCATGACATTTTGATCAAATGCAGTGGTGAAAATGAAGGGTTGCATTATCCAGTTCTTTCTGTTTGTATTGATAACAAGACTGTGATCAGAGTGAAGAGGCTGCAATGGAATTTCAGGGGTAACCATCCAATTTTTGTTGATGGGTTGGTTGTGGATTTGTTGTGGGATGTTCATAACTGGTTTTTCAACCCTGCACCTTCTGGATATGCAGTTTTCATGTTCAGGACTAAGACTGAATTGGATAGTAGATTGTGGTTAGAGGAGAAGACAGTACTTAGAGATGAAGATACATTTGAATTCTCTTTGTTGATCTATGCATTTGTTCAATTAGCTCATGGTATGTTCAAAAGCTGCTCAAAGCGCGTAACGACGGGTCTTGATGCAATGCAGTTGCAGCTATCTGCTGTAGTTGTCAAATTTGCTCTTTAA 993 0.3676 MRDIISCFSENAVNVTPHSSCSSFSSKAFISPNLTPSTQNSVSYVYKAILPNNQKHFFITVTWSMSHSNQGLTISLGEEETIFRLNTNSRFFRKKGSKLLESDELKIEIFWDFYNAKYDTGPEPVNDFFVAILIDAEVVLILGEVTMTKKFKTRRIPLAKVSLLSRREHCSGNTIYKTKTQFCENGTLHDILIKCSGENEGLHYPVLSVCIDNKTVIRVKRLQWNFRGNHPIFVDGLVVDLLWDVHNWFFNPAPSGYAVFMFRTKTELDSRLWLEEKTVLRDEDTFEFSLLIYAFVQLAHGMFKSCSKRVTTGLDAMQLQLSAVVVKFAL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0223 330 Pfam Plant protein of unknown function (DUF868) 37 295 IPR008586 -
Lal25g0223 330 PANTHER EXPRESSED PROTEIN 1 294 IPR008586 -
Lal25g0223 330 PANTHER DUF868 FAMILY PROTEIN 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0223 Lal-Chr25 1530880 1534713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0223 1 295 EF-hand Containing Proteins AT5G28150 34.551 3.23e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0223 - - gmx:100798692 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0223 25 1530880 1534713 Lal25g0223 25 1530880 1534713 ECH
Lal25g0223 25 1530880 1534713 Lal1g0421 1 2622947 2623912 PCT
Lal25g0223 25 1530880 1534713 Lal2g0334 2 2031069 2032016 PCT
Lal1g0421 1 2622947 2623912 Lal25g0223 25 1530880 1534713 PCT
Lal2g0334 2 2031069 2032016 Lal25g0223 25 1530880 1534713 PCT