Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0421 ATGAGAGATATAGTTTCTTGTTTCAGTGAGAATTCAGTAAATGTGTCTCATTCCTCATGTTCTAGCTATTCAAAAAATGCTTGCATTTCTCCAAACCTTGCACCTTCAACACAAAATTCAGTTTCCAATGTCTACAAAATAGTCCTCTCCACCCTCAAACAAATTTTGATCACTGTAACTTGGTGTAAGAGCCACTCCAACCAAGGACTCAGCATAAACTTTGGTGATAATAATCATGATCCATCATCAGCTTCAGCTCCCGCATCACCCTTTAGACTCAACACAAATTCAAGATTTTTCAGGAAGAAAAAAGGTAGCAAATTGATTGAGTTATCTGATGAGTCAAAAGTTGAAGTCTTATGGGACCTCTCAAATGCAAAATATGATACTGGTGCTGAACCTGTTGAAGGGTTTTATGTAGTGGTTATTGTTAATTCAGAAATAGGACTTGTTATTGGTGATAACACAGCTGAAGAAGCATTTTTCAAGAAGTTTATAACCAGCACCACACATATTGCAAAAGTTTCTCTTTTATCAAGAAGAGAACATTGTTCAGGTAATACACTTTACACAACCAAGGCACAATTCTGTGATACTGGAACATTTCATGATGTAATGATAAGGTGCAGTGTTGTGAATGAAGGAAGGTTAATAAACTCATCATCATCATCATCATTACCAGTTCTATCTGTTTGCATTGATAAGAAGACAGTAATTTGTGTGAAGAAGCTTCAGTGGAATTTTAGGGGTAACCAAACAATTTTTGTTGATGGGTTACTTGTTGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACACTGTTTCTTCTTCTGGGTATGCAGTGTTCATGTTTCGAACTAGGAGTGGTTTTGATAGCAGATTGTGGTTAGAGGAAAAGGCTGCACATAAAGATAAAGACAGAGTTGAATTCTCATTGTTGATCTATGCATGTAAGAGTTCTTAA 966 0.3613 MRDIVSCFSENSVNVSHSSCSSYSKNACISPNLAPSTQNSVSNVYKIVLSTLKQILITVTWCKSHSNQGLSINFGDNNHDPSSASAPASPFRLNTNSRFFRKKKGSKLIELSDESKVEVLWDLSNAKYDTGAEPVEGFYVVVIVNSEIGLVIGDNTAEEAFFKKFITSTTHIAKVSLLSRREHCSGNTLYTTKAQFCDTGTFHDVMIRCSVVNEGRLINSSSSSSLPVLSVCIDKKTVICVKKLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNTVSSSGYAVFMFRTRSGFDSRLWLEEKAAHKDKDRVEFSLLIYACKSS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0421 321 Pfam Plant protein of unknown function (DUF868) 36 319 IPR008586 -
Lal1g0421 321 PANTHER EXPRESSED PROTEIN 1 320 IPR008586 -
Lal1g0421 321 PANTHER DUF868 FAMILY PROTEIN 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0421 Lal-Chr1 2622947 2623912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0421 1 320 EF-hand Containing Proteins AT5G28150 36.223 2.62e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0421 - - lang:109353379 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0421 1 2622947 2623912 Lal1g0421 1 2622947 2623912 ECH
Lal1g0421 1 2622947 2623912 Lal2g0334 2 2031069 2032016 LSH
Lal25g0223 25 1530880 1534713 Lal1g0421 1 2622947 2623912 PCT
Lal1g0421 1 2622947 2623912 Lal25g0223 25 1530880 1534713 PCT