Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0167 ATGTCACATGTATATACACTTATTTTCAGACCTGGTTCACTTGAAATTCCTAAGAAGTTCCTCAGAAATGCTGCACTAGGCACTGCCTCTGTAACTCTGTTAAATCAAGGTAACAAAACATCAAAGGATAGAAGTCACAAAGTCACTGATTGCAGATCATATAGAAGCCAAGTTCCAGAGAGAAAGCGTCCTAGTAGAGTATCTGAATTGGAATCTCAGATTTCTCAACTTAAAGTGGATTTGAAGAATCTGAGGAACCAGCTCAGTTTGTCAGAATCATGCAAAAAACAACATCAACAAGATGCTAAGGTGTACAAGGAACAACTATTAGCTTTATCTGTGAAACTTGAAGATTCTCAACCTCTAAAGCTCACTGCTTCTGAAGAAGCTTTTGTTATTGACCCAAAGAAAATTGCAGAAGAGAATGATGATGAATCATGGCAATGGAAAACAGTTAAATATTATGTCCTGAACACTGCAATCCATGAAATTCAGCAGCTTAAGGTACAAGTTGAATTAATAGCTAACTGTGAGAAAGAACAAGCCCAACTTGCAGAATCATTAGACTTGGAACTAGTAAACTTGAAGCAAAACTTGGAAGAATCTCTTTCTCTTATGAAAAACAATTTCATGGATTGTCATGAGTCAGTTCAAGCCCAAGATTTGGTGAATGAGACATTGAAGCAACTTGAGGCTGCAAAAAAAACTCTAGAGAACCTAAGGGCTGAAGCTGCAAAATCTGTATATGGTAACAATAATACTGCTTTGGAGTTAGAGCACTCTAGAGCAAGGGTGAACTCGCTGGAGGGACTCGTAAGAAAACTCGTTGCAAGCCTTATTAGTATTAAATGTAGCCATTGTGCAAATCTTGCAGGTGATTTTAACTTTGAGAAGGAAGCTGAAAGATTGAAAAAGGGAAAGGACTCTAATGAGATTGAAGCAGAAATTCATTCTTTGGAGTTTGTCATAGAGGCTGCTGAGACTAAGTACCAAGAAGAGTTTCTGAGCACAGTGATGATCAGCAATGCATATGAATTGATTGATATGATAAAATCAGAATCAAGTCAGAGAGAGTTTGAGCTAGAAGCTGAGTTGAAAGGAAAGAAAGCTGATATTGAAGAGTTGAAAGAAAGCCTAATGAATAAGGAAACTGTGTTGAAAAGTGTTAAAGAGGAGAATGAGAAGCTGAATTTGAAGCTTGAAAAAAGCATGTCAATGTCATCACAAGTAGAACATGAATTTAGAATGGAACTTAAAAGATTATATGAATATGTGGCTCAACTAAAAGAAGATCTTATGGACAAAGAGGCAACACTGCAAAGCATATCAGAAGAGAATGAAATGCTGAAGATTGAAATCAATAACAAGTTAAGTGAGGGAGTTAGTGCAAAACTAGAAGCAGCTAAGGCCGTGGAACGCGACGCTGCAATGAAACTTGGGATTGTGATGGATGAGGCTCATAGGATCAACCAGAAAGAAATAAAGGTGGCAGAGAAATTGGAAAAAGCACAAGCTGCAAAATCAGAATTTGAAACAGAATTGAAAAGAGTGAAGATACAATCTGATCAATGGAGAAAAGCTGCAGAGGCTGCTATTTCTATGCTTTCAATTGGAAACAATGTGAAAATGAGTAAGAGGTCTTTGTCATTTAACAGCAACTATAGTATCTCAACAACTTATAATGAAGACATTGAGGATTCTTTCCAGAGAAAGAAAAATGGGAACATGCTGAAGAAGATTGGAATCTTGTGCAAGAATCCACTACAGAAATAG 1773 0.37 MSHVYTLIFRPGSLEIPKKFLRNAALGTASVTLLNQGNKTSKDRSHKVTDCRSYRSQVPERKRPSRVSELESQISQLKVDLKNLRNQLSLSESCKKQHQQDAKVYKEQLLALSVKLEDSQPLKLTASEEAFVIDPKKIAEENDDESWQWKTVKYYVLNTAIHEIQQLKVQVELIANCEKEQAQLAESLDLELVNLKQNLEESLSLMKNNFMDCHESVQAQDLVNETLKQLEAAKKTLENLRAEAAKSVYGNNNTALELEHSRARVNSLEGLVRKLVASLISIKCSHCANLAGDFNFEKEAERLKKGKDSNEIEAEIHSLEFVIEAAETKYQEEFLSTVMISNAYELIDMIKSESSQREFELEAELKGKKADIEELKESLMNKETVLKSVKEENEKLNLKLEKSMSMSSQVEHEFRMELKRLYEYVAQLKEDLMDKEATLQSISEENEMLKIEINNKLSEGVSAKLEAAKAVERDAAMKLGIVMDEAHRINQKEIKVAEKLEKAQAAKSEFETELKRVKIQSDQWRKAAEAAISMLSIGNNVKMSKRSLSFNSNYSISTTYNEDIEDSFQRKKNGNMLKKIGILCKNPLQK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0167 590 Coils Coil 67 87 - -
Lal25g0167 590 Coils Coil 358 406 - -
Lal25g0167 590 MobiDBLite consensus disorder prediction 40 68 - -
Lal25g0167 590 Coils Coil 309 329 - -
Lal25g0167 590 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 20 588 - -
Lal25g0167 590 MobiDBLite consensus disorder prediction 37 69 - -
Lal25g0167 590 Coils Coil 418 459 - -
Lal25g0167 590 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 20 588 IPR029688 -
Lal25g0167 590 Coils Coil 185 205 - -
Lal25g0167 590 Coils Coil 220 247 - -
Lal25g0167 590 Coils Coil 489 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0167 Lal-Chr25 1071885 1075045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0167 - - gmx:100798050 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0167 25 1071885 1075045 Lal25g0167 25 1071885 1075045 ECH
Lal25g0167 25 1071885 1075045 Lal8g0131 8 908805 913409 LSH
Lal25g0167 25 1071885 1075045 Lal1g0364 1 2201998 2210611 PCT
Lal25g0167 25 1071885 1075045 Lal2g0267 2 1554550 1559161 PCT
Lal25g0167 25 1071885 1075045 Lal9g0257 9 1602387 1606810 PCT
Lal1g0364 1 2201998 2210611 Lal25g0167 25 1071885 1075045 PCT
Lal2g0267 2 1554550 1559161 Lal25g0167 25 1071885 1075045 PCT
Lal9g0257 9 1602387 1606810 Lal25g0167 25 1071885 1075045 PCT