Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0364 ATGCAGACCCCAAAGACAAGAAGTGGCTCCTCTGAGGTACCACAGAAGCTTTCTCCTCGCGTCATTCGACAACTCAGGACTACTACTCTAGAGATGGGATCTGTATCTTCTTTAAATCAAGCTAATAAAATATCAAAAGAAAGAAGCCCCAACGCCGCTGGCCGCAAATCACCTAGAAGCCCAGTTCCTGAGAAGAAGCGCCCCAGCAAAATATCTGAATTGGAATCTCAAATTTCTCAACTTCAAGAGGATTTGAAGAAGATGAGGGACCAGCTTATTTTATCTGAATCATGCAAGAAACAAGCTCAGCAGGATGCTGAGGAGTCCAAGGAGCAACTGTTAGCTTTATCTGCAAAACTCGAAGATTCGCAAAAGAACCTTCTTGAGCAATCTGCTACTGGAGAAGATCATGTGATTGTGCTCCAGAAGTTGTCAGAAGAACGCGATGAGGCATGGCAATCCAAGCTTGAGGTTTCACAAAAGCCGCTCTCAGCCCACTCTTCGGCGCTGGCTTCTGCGATGAATGAGACTCTGCAGCTCAAGGTCCAACTTGAATTGGTAGCTAACTTTGAGAGTGCACAAATCCAACATGCCGAATCAGCATATGTGGGACTACTAAACCTGAAGCAAAACTTGTCAGAAACTCTATCTCTTGTGGGTAGCATGAAAAAGCAACCCAGAAATTGCAAAGCATCTGAATCTCAGGCCCAAGATCTGATATATGAGACTTCGTTGCAACTTGAAGCTGCGAAAAAAGCTGTGGAGCTCCTACATGCTGACGCTGTAAAAGCTGTAGATGCTTACAACTCTATTTCTTTAGAGTTAGACCAGTCTAGAGCACGAGTGAATTCATTAGAAGCACTTGTAACAAAACTTGAGGCAGACCTCATAAGTAATGAAGGCATTCAGTCTCGAAATCTCGCTGGTGATCATAAATTTAGGCAGGAACCTAAATGGTTGAAAGAGGATGAGGATCCGAATCAAGTTGGAGCGGAAATTTATTCTTTGAAGTCTGAGGTTGAAAGATTGAGATCTGCTATAGAGACTTCTGAGACTAAACACCAAGAAGAACAGATTCGGAACACAGTGCAAATCAGCAATGCCTATGAGTTGATGGAGAAAATAAAATCTGAATCAAGTCAGAAGGAATGTGAGATAGAGGGTGAGTTGAACAGAAAGAAAGCTCATATCGAAGAGTTGAAGGCTAACCTAATGGACAAAGAAACTAAGTTGCAAGGTATCATGGAGCAAAATGAGAACTTGAATTTAATGCTTGATGAGAGTGTGACATCCCGAAAAGAACACAAACTTGATAAGGAACTTAAAAGACTAGATGAATGTATGGCTGACTTGAAGGCTGATATGATGGACAAGGAGACAACATTGCAAAGCATATCAGAAGAGAATGAGATGCTGAAGTTGGAAATGAAGAAGAGGTTCTCCGATGGTGGGAATTTGAGGGAGGAAGTTGCTTCAGAAGTAGAGGCAGCTAAGGCTGCAGAACGCGACACTCATGTGAAACTCGGAATTGTGATGGAAGAAGCAGATAAGAGCAACCAGAAGGTGGCGAGGGTGACCGAGCAGCTAGAAGCAGCACAGGTAACAAATTCGGAAATGGAAGCAGAACTGAGAAGGCTGAAGGTACAGTCTGATCAATGGAGGAAGGCTGCAGAGGCGGCAGCTGCTTTGCTTTCCGCAGGAAACAATGGGAAGCTAACAGACAGAACCATGTCATTGGATAGCTATAAGTGCTCAGAATATGGAGGAGAAATGGATGATGATGAGTTCCACAGAAAGAAAAATGGCAACATGCTGAAGAAGATTGGTGTCTTATGGAAGAAGCCTAAAAAATAA 1854 0.432 MQTPKTRSGSSEVPQKLSPRVIRQLRTTTLEMGSVSSLNQANKISKERSPNAAGRKSPRSPVPEKKRPSKISELESQISQLQEDLKKMRDQLILSESCKKQAQQDAEESKEQLLALSAKLEDSQKNLLEQSATGEDHVIVLQKLSEERDEAWQSKLEVSQKPLSAHSSALASAMNETLQLKVQLELVANFESAQIQHAESAYVGLLNLKQNLSETLSLVGSMKKQPRNCKASESQAQDLIYETSLQLEAAKKAVELLHADAVKAVDAYNSISLELDQSRARVNSLEALVTKLEADLISNEGIQSRNLAGDHKFRQEPKWLKEDEDPNQVGAEIYSLKSEVERLRSAIETSETKHQEEQIRNTVQISNAYELMEKIKSESSQKECEIEGELNRKKAHIEELKANLMDKETKLQGIMEQNENLNLMLDESVTSRKEHKLDKELKRLDECMADLKADMMDKETTLQSISEENEMLKLEMKKRFSDGGNLREEVASEVEAAKAAERDTHVKLGIVMEEADKSNQKVARVTEQLEAAQVTNSEMEAELRRLKVQSDQWRKAAEAAAALLSAGNNGKLTDRTMSLDSYKCSEYGGEMDDDEFHRKKNGNMLKKIGVLWKKPKK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0364 617 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g0364 617 Coils Coil 390 417 - -
Lal1g0364 617 Coils Coil 275 295 - -
Lal1g0364 617 MobiDBLite consensus disorder prediction 28 74 - -
Lal1g0364 617 MobiDBLite consensus disorder prediction 28 47 - -
Lal1g0364 617 Coils Coil 515 556 - -
Lal1g0364 617 Coils Coil 71 91 - -
Lal1g0364 617 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 617 - -
Lal1g0364 617 MobiDBLite consensus disorder prediction 49 72 - -
Lal1g0364 617 Coils Coil 448 475 - -
Lal1g0364 617 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 617 IPR029688 -
Lal1g0364 617 Coils Coil 340 360 - -
Lal1g0364 617 Coils Coil 99 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0364 Lal-Chr1 2201998 2210611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0364 - - gmx:100798862 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0364 1 2201998 2210611 Lal1g0364 1 2201998 2210611 ECH
Lal1g0364 1 2201998 2210611 Lal2g0267 2 1554550 1559161 LSH
Lal1g0364 1 2201998 2210611 Lal9g0257 9 1602387 1606810 LSH
Lal25g0167 25 1071885 1075045 Lal1g0364 1 2201998 2210611 PCT
Lal8g0131 8 908805 913409 Lal1g0364 1 2201998 2210611 PCT
Lal1g0364 1 2201998 2210611 Lal25g0167 25 1071885 1075045 PCT
Lal1g0364 1 2201998 2210611 Lal8g0131 8 908805 913409 PCT