Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0031 ATGATAATAATGCAGACAACAACTCAAGTAAAACAAAATAACGTAACAGGTAGAGTTGTTCTGTTTTTGACAAACCTTATATATATGATAAGGTTGTTGGTTGTGGTCTTGGTTTCAGATTATCTCCAAGATCATATCACTAATGGCAATCTTTCCCTTCTTCTTCACACTGCTATTTACGCTTCTCACCTTTTCAGTATCTATTCCCCTTACAATACATGTTTTTCTTTTTCTTATGGTAAAATCATTATTCAAGTCCTTCAGTGTGACACAAATATTGTGTTTACAGATTTGTTTGTGCAAACAGAAGGCCTTAACTTTGGAATAAACTATGGACAAATCGCGAACAATCTTCCTTCTCCATCACGTGTGGCGCTTCTAATAAAATCACTTAATGTAAGCAGAATTAAACTGTATGATGCTAATCCAAATGTTCTATCTGCCTTCTCAAATACCAATGTAGAATTCATTATAGGAGTTGGAAATGAGTACCTACAAAGCATGAGAGACCCTTCTAAGGCACAAACATGGATTCAACAGAATGTTCAACCTTACCTTTCAAATACCAAAATCACATGCATCACTGTAGGAAATGAAGTCTTCAATAGCAGTGCCACTGACACTCAGCACATGACAAATCTTCTCCCAGCAATGCAAAATGTGTACAATGCCCTTGTTAATCTTGGACTAGCACAACAAGTTACTGTCACAACAGCACATTCTTTCAACATCTTATCAAATTCATTCCCTCCTTCATCTGGAGCCTTTAGTCAAAATCTCATACAATATATCCAACCCCTTCTAAGTTTTCATTCTCAAACCAAATCACCTTTTCTAATTAATGCATATCCTTTCTTTGCATACAAGGACAACCCTGATCAAATTTCCTTAAGTTATGTACTATTCCAACCAAACCAAGGCACAATTGACCCAAACACAAATTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTGTATGCTGCTATCAAGGTACTCGGCCACACTGATATTGAAGTAAGGATTTCTGAGACAGGTTGGCCTTCAAAGGGCAACCCTGATGAAATTGGAGCCACACTTGAGAATGCTGAAATATATAATAGCAATTTGTTGAAGAGGATAGAGCAGAAGCAAACCACTCCTGCAAATCCTACTATTCCTATTGATATATATGTGTTTGCACTTTTTAATGAAGATATGAAACCTGGTCCTACATCAGAAAGAAACTATGGCCTTTATTATCCTGATGGTACCCCAGTTTATAACATTGGATTACAAGGTTATCTCCCAGAAATGGTTATACAATCCAAATCCAATACTTTGTCCATCCATTTTTTCATCTACATAGTTACATGCTTAGCGTTTGCTTGGGAACTTTCAAGATTCTGA 1395 0.3627 MIIMQTTTQVKQNNVTGRVVLFLTNLIYMIRLLVVVLVSDYLQDHITNGNLSLLLHTAIYASHLFSIYSPYNTCFSFSYGKIIIQVLQCDTNIVFTDLFVQTEGLNFGINYGQIANNLPSPSRVALLIKSLNVSRIKLYDANPNVLSAFSNTNVEFIIGVGNEYLQSMRDPSKAQTWIQQNVQPYLSNTKITCITVGNEVFNSSATDTQHMTNLLPAMQNVYNALVNLGLAQQVTVTTAHSFNILSNSFPPSSGAFSQNLIQYIQPLLSFHSQTKSPFLINAYPFFAYKDNPDQISLSYVLFQPNQGTIDPNTNLHYDNMLYAQIDAVYAAIKVLGHTDIEVRISETGWPSKGNPDEIGATLENAEIYNSNLLKRIEQKQTTPANPTIPIDIYVFALFNEDMKPGPTSERNYGLYYPDGTPVYNIGLQGYLPEMVIQSKSNTLSIHFFIYIVTCLAFAWELSRF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0031 464 Gene3D Glycosidases 106 431 - -
Lal25g0031 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 100 444 - -
Lal25g0031 464 SUPERFAMILY (Trans)glycosidases 107 426 IPR017853 -
Lal25g0031 464 Pfam Glycosyl hydrolases family 17 108 425 IPR000490 GO:0004553|GO:0005975
Lal25g0031 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 100 444 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0031 Lal-Chr25 228520 239432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0031 157 459 Glycoside Hydrolase AT2G27500 65.132 1.25e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0031 - - gmx:100786020 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0031 25 228520 239432 Lal20g1217 20 16671276 16673983 PCT
Lal20g1217 20 16671276 16673983 Lal25g0031 25 228520 239432 PCT