Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1179 ATGGATCATATAAGTAACGAGGCCCGTGTTGATCATTTTCCGATCGGCCCTTCGGGCATTCTTGGTAGAACAATTGCCTTCAGGGTTCTGTTTTGTAAGTCAATCTCACATTTGAGGCATCAGATATTTCATGTGTTGTTGGATATCTTGCATAAGTTTAGAAGAGTTTGGGCACCCATTATATCATTGTTGAATCCAAGAAACCCGCAGGGGATATTAGCAATAATTACAATAGTTTTTTTCTTGTTGAAACGGTCCACGGGTGTAAAGGTAAAGGCCGAGATGGCGTATAGGAGGAAATTTTGGAGAAATTTGATGAGAAGTGCATTGACCTATGAGGAATGGGCTCATGCAGCTAAGATGCTTGATAAAGACAGACCAAAGATGAATGAAGCAGACCTTTATGATGTCGAGTTAGTGAGGAACAAACTTCAAGAGCTTCGCCACCGAAGGGAAGAGGGATCTATTAGAGATATAATATTTTGTATGCGTGCCGATCTTGTTCGAAATTTAGGTAATATGTGTAACCCTGAGCTCCACAAGGATAGGCTTCATGCTCCCAGACTAATCAAGGAGTATATCGATGAGGTATCAACTCAGTTGAGAATGGTTTGTGACTCTGATTCGGAAGATCTTGCGCTGGAAGAAAAACATGCTTTCATGCACGAAACTAGACATGCTTTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCACTCGGAGCTTTTCATGTGGGTGTAGTTAAAACACTCGTAGAACATAAACTTCTGCCGAGGATAATTGCTGGTTCAAGTGTAGGATCACTTATGTGCGCGGTTGTTGCCACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTCGAGGATTCCTTGCAGTCGTTGCAGTTTTTTGATCAAATGGGTGGGATTTATACGGTTGTAAAAAGGGTCACGACGTTTGGTGCAGTTCACGAGATCAGGCAGTTGCAAATGTTGTTGAGGCATCTAACAAGCAATCTTACATTTCAGGAAGCGTATGATATGACTGGTCGGATTCTCGGGATCACAGTTTGCTCCCCAAGAAAGCATGAACCTCCTAGATGCCTTAACTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCTTTTCCTGGTCTTTTCGAGGCTCAGGAACTGATGGCAAAGAATAGAAGTGGAGAAATTGTTCCTTACCATCCTCCGTTTAATTTGGGTCCTGAAGAAAGCTCCACACCGGTGCGCCGATGGAGGGATGGTAGCTTGGAGATGGATTTACCTATGATCCAGTTGAAGGAGCTGTTTAATGTCAATCATTTTATAGTTAGTCAGGCCAATCCTCATATTGCACCATTATTGAGATTGAAAGAAATTATACGAGCTTACGGAGGTAACTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAGCATCGATGTAATCAAGTACTGGAACTTGGCTTTCCATTAGGTGGACTTGCGAAGCTGTTTGCTCAAGACTGGGAGGGTGATGTAACCGTTGTTATGCCTGCAACTCTTGCTCAGTACTCGAGAATTATACAGAACCCGTCTTACGTAGAGCTTCAAAAGGCAACTAACCAAGGAAGACGATGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGGAATTGAGATTGTTCTTGATGAGTGTGTTGCAATTCTCAATCATATGAGGAGACTTAAAAGAAGTTCCGAAAGAGCTGCGGCTGCTGCTTCTCATGCTCTGCCCAGTGCTGTCAAATTCAGTGCTATAAGAAGAATACCTTCGTGGAATGTCATTGCTCGAGAGAATTCGTCAGGCTCCCTTGACGACTTCATCGCAGATGCTTCTTCCACATTGCATCAAAATGTCAATGGTTACGGAGCCGCAAGTAAAAACTGGAAGTCACACCGTAGCATACATGATGTAAGCGACAGTGAATCCGAAAGTGCAGACTTGAATACTTGGACCCGATCCGGTGGGCCTTTGATGAGGACTGCTTCAGCAGATACATTCATCGACTTTGTCCATAACTTACAACTTGAAACTGAACTAAATAGCGGCACGGCGGATGACGCTAACCCTCATGATTTTCAGTACCCTAATCCCAGGCTCACAACACCAGATAGGAGATCCGAGAGCGCCGAATCTGTTAATAAGGAAAATGGCAACAGTGTCGTGACGAATGGGTCTAGCATAATGTTAACCGAAGGTGACCTTTTGCAGCCCGAAATGATCCATAATGGAATTGTGTTTAATGTTGTCAAGAAAGAAGAGTTGACATCTTCATATAGGAGTAATGATTATGATAGTTATAACAATGAAGTTGCTGAGTGTGTCCAAATTGACTGTCCAGGGAAGGAGATCGACGCTGCTAGCTCAGCTTCTGAAACTGGAGACGACGATTCGACAACTGCCAAGTCCTTAACTGAAACACATTACTATAATGGCACGGATCATCGTGGTGAATAA 2496 0.4363 MDHISNEARVDHFPIGPSGILGRTIAFRVLFCKSISHLRHQIFHVLLDILHKFRRVWAPIISLLNPRNPQGILAIITIVFFLLKRSTGVKVKAEMAYRRKFWRNLMRSALTYEEWAHAAKMLDKDRPKMNEADLYDVELVRNKLQELRHRREEGSIRDIIFCMRADLVRNLGNMCNPELHKDRLHAPRLIKEYIDEVSTQLRMVCDSDSEDLALEEKHAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSLMCAVVATRSWPELQSFFEDSLQSLQFFDQMGGIYTVVKRVTTFGAVHEIRQLQMLLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGEIVPYHPPFNLGPEESSTPVRRWRDGSLEMDLPMIQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGNFAAKLAHLVEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSRIIQNPSYVELQKATNQGRRCTWEKLSAIKANCGIEIVLDECVAILNHMRRLKRSSERAAAAASHALPSAVKFSAIRRIPSWNVIARENSSGSLDDFIADASSTLHQNVNGYGAASKNWKSHRSIHDVSDSESESADLNTWTRSGGPLMRTASADTFIDFVHNLQLETELNSGTADDANPHDFQYPNPRLTTPDRRSESAESVNKENGNSVVTNGSSIMLTEGDLLQPEMIHNGIVFNVVKKEELTSSYRSNDYDSYNNEVAECVQIDCPGKEIDAASSASETGDDDSTTAKSLTETHYYNGTDHRGE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1179 831 Gene3D Cytosolic phospholipase A2 catalytic domain 312 491 - -
Lal24g1179 831 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
Lal24g1179 831 MobiDBLite consensus disorder prediction 695 738 - -
Lal24g1179 831 MobiDBLite consensus disorder prediction 798 831 - -
Lal24g1179 831 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Lal24g1179 831 MobiDBLite consensus disorder prediction 804 821 - -
Lal24g1179 831 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Lal24g1179 831 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 714 - -
Lal24g1179 831 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 714 - -
Lal24g1179 831 Gene3D Cytosolic phospholipase A2 catalytic domain 230 311 - -
Lal24g1179 831 Pfam Patatin-like phospholipase 233 430 IPR002641 GO:0006629
Lal24g1179 831 CDD Pat_SDP1-like 163 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1179 Lal-Chr24 12862281 12866831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g1179 1 801 Acyl Lipid Metabolism Gene Families AT5G04040 72.153 0.0 1189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1179 K14674 - gmx:100807526 1301.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1179 24 12862281 12866831 Lal24g1179 24 12862281 12866831 ECH
Lal20g0284 20 2110440 2114867 Lal24g1179 24 12862281 12866831 PCT