Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0284 ATGGATCATATTAGCAATGAAGCTAGTGTGGATCGTTTTCCAATTGGCCCTTCTGGTATTATTGGTAGAATAGTTGCTTTTAGGGTTCTTTTCTGCAAATCTATGTCACATTTTAGGTACCAGATGTTTTATTTGTTGTTAAATCTCATCTTTAAGTTTAAGGGTATTTTGGGATCCATTATATCATCATTGCATCCAAAACACCCTCAAGGGATATTGGTAATGATGACAATAGTTGCATTCTTGTTAAAACGATATTCGAGTGTGAAGGTTAGGGCCGAAATGGCATATAGGAGGAAATTTTGGAGGAACATGATGAGAACTGCGTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGTCATCAAGATTGAATGAATCAGACTTTTATGATGTAGAATTGGTGAGGAACAAGCTTCAAGAGCTTCGCCATCGTCGGCAAGAGGGGTCTCTTAGAGATATAATATTTTGGATGCGTGCCGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGAACTTCACAAAGGTAGGCTCCAGGTGCCTAAATTAATCAAGGAGTATATCGATGAGGTATCCACCCAGTTGAGAATGGTCTGTGACTCTGTTTCAGAGGAGCTATCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACACGCTTTTGGGAGGACAGCGTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTTGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCTGTTGTTGCCACTAGATCTTGGCCCGAGCTTCAAAGCTTTTTCGAGGATTCTTGGCATTCGTTACAATTTTTCGATCAAATGGGTGGGATTTTTACAGTTGTGAAGAGGGTCACAACACTTGGTGCTGTTCATGAGATCGGACATTTGCAAATGATGCTGAGGCATTTAACAAGCAACCTGACATTTCAAGAAGCTTATGACATGACAGGTAGGGTTCTTGGGATTACAGTTTGCTCCCCAAGGAAGCATGAACCCCCTAGATGTCTTAACTACCTGACTTCGCCACACGTCGTTATATGGAGTGCAGTCACCGCCTCTTGTGCCTTTCCCGGCCTTTTTGAGGCTCAGGAATTGATGGCAAAGGACAGAAGTGGAGAGATTGTTCCTTACCATCCCCCTTTTAATTTGGGTCCCGAGGAGGGATCCACACCGGTTCGCCGTTGGAGGGATGGAAGCTTGGAGATTGATTTACCTATGATGCAATTGAAAGAGCTGTTCAATGTCAATCATTTTATAGTGAGTCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAGTTTGTACGAACTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCACCTTGTGGAGATGGAGGTGAAACATAGGTGTAACCAAATACTGGAACTTGGGTTTCCATTAGGTGGACTTGCAAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTAACTGTTGTTATGCCGGCAACCCTTGCTCAGTACTCAAAAATTATACAGAACCCTTCTTATGGGGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCGGCCATAAAAGCAAATTGTGGCATTGAGCTTGCACTTGATGAGTGTGTTACAATTCTCAATCATATGAGAAGACTCAAAAGAAGCGCTGAGAGAGCTGCTTCTGCTTCTCACGGTTTGTCCACTGCTGTCAGATTCAGTGCTTCAAGAAGAATTCCTTCGTGGAATTGCATTGCGCGAGAGAATTCGACGGGATCCCTTGAAGACCTCAACGATGTCAATTCCTCGTTGCATCAAGTTGTTAGTGGTTCCATTGCAGCCAACGGCAAAAGTTGGAAAAACCACCGCAGCATACACGACGGAAGTGACAGCGAATCTGAAAGTGTTGATTTAAATTCATGGACCAGATCTGGTGGGCCATTGATGAGAACTGCTTCGGCTAATATGTTCATCGACTTTCTCCAGAATTTAGATGGTGATACCGAACTAAATAGAAGTATAGTGGCCTATGATTTTCAGTATGACAGTCCGAGGCTCACAGCACAAGATAGGAACTCGGAAACAGAATGTGATCAAATCGGCAACAATGTTGTGAACGGATCTAGCATATTGATAACTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTCTTTAATGTTGTCAAAAGAGAAGATTTAACATCTTCACATAGGAATCATGATTTGGAAAATTACAACAATGAAGTTGCTGAATGTGTTCAAATTGAATGTCCTGAAAAAATGGATGCTGCTAGTTCTACTTCTGAATGTGGAGATGAAGAATCAATACCAGCCATGCCCTTAACTGAAACTTCATATTACAATTCCATGGATCATTCTGTTGCAGATTTGGATAAAGGATCATAG 2484 0.4227 MDHISNEASVDRFPIGPSGIIGRIVAFRVLFCKSMSHFRYQMFYLLLNLIFKFKGILGSIISSLHPKHPQGILVMMTIVAFLLKRYSSVKVRAEMAYRRKFWRNMMRTALTYEEWAHAAKMLDKESSRLNESDFYDVELVRNKLQELRHRRQEGSLRDIIFWMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVSTQLRMVCDSVSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTLGAVHEIGHLQMMLRHLTSNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVTILNHMRRLKRSAERAASASHGLSTAVRFSASRRIPSWNCIARENSTGSLEDLNDVNSSLHQVVSGSIAANGKSWKNHRSIHDGSDSESESVDLNSWTRSGGPLMRTASANMFIDFLQNLDGDTELNRSIVAYDFQYDSPRLTAQDRNSETECDQIGNNVVNGSSILITEGDLLQPERIHNGIVFNVVKREDLTSSHRNHDLENYNNEVAECVQIECPEKMDAASSTSECGDEESIPAMPLTETSYYNSMDHSVADLDKGS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0284 827 MobiDBLite consensus disorder prediction 790 827 - -
Lal20g0284 827 Gene3D Cytosolic phospholipase A2 catalytic domain 230 320 - -
Lal20g0284 827 Gene3D Cytosolic phospholipase A2 catalytic domain 321 494 - -
Lal20g0284 827 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Lal20g0284 827 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 713 - -
Lal20g0284 827 MobiDBLite consensus disorder prediction 641 660 - -
Lal20g0284 827 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Lal20g0284 827 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 713 - -
Lal20g0284 827 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Lal20g0284 827 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Lal20g0284 827 CDD Pat_SDP1-like 163 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0284 Lal-Chr20 2110440 2114867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0284 4 791 Acyl Lipid Metabolism Gene Families AT5G04040 73.665 0.0 1191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0284 K14674 - gmx:100791261 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0284 20 2110440 2114867 Lal20g0284 20 2110440 2114867 ECH
Lal20g0284 20 2110440 2114867 Lal24g1179 24 12862281 12866831 PCT