Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0944 ATGCGGTCCGATACGGCTTGCTGTGATCCAAATGCGGTCCCATGTGATTGCGTTGCAGCCCGATGTGGCCGCATCATTGTGATTCAGAATCACACCATAATTGCGTGTGATGTCGTTGCGGCGAACACCGCAACCGCAAACGGGACTGAACTTGTCAATATCTCGAAACCTTGGTCCAATACGACTTCTGTGAATGAAACTTATGTTTCTCACCAGAGGCAGATGCAGCCAAGAAAATTCAGCATCTTAGATAGAATGGAAGCCGGTCTACTACAAGCTCGAGCTGCTATTGGACAAGCTAAAGTCGAGAATCAAACACATGATCCGGACTATGTCCCAGAAGGTCCAATGTATTGGAATGCTAAAGCGTTTCACAGTATGATGCATGGCCATGGGTCAGCTCAAGCCCCAGTGCGCAGCCGTGGTGGCCGACACGGCCTGACCGTGTTACTCTCTGTAATTCTTCATCACAAGGAGCCTCTGGTACACGGCTGTTATCACCATAGGATTGGCCGTGTACTGCTTCCTTGCTGCTGTGACCCTGAAGTTGGAACATTGCACTTTTCTCTCATACTTAATTATCATCTCTTCACAAAAAATTTCTACGACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTATTCGTCTACGAAGAAGGCGAGCCTCCAGTTTTTCATAACGGGCCTTGCAAAAGCATATACTCCATGGAAGGGAATTTCATCCATGCAATGGAGATGAATGATCAATTTCGAACAAGAGATCCTGAGAAAGCACATGTATTTTTCCTTCCTTTTAGTGTAGTAATGCTGGTTCGATTTGTGTATATAAGGGACTCCCATGACTTTGGCCCCATACGAAAAACTGTCATAGACTACGTCAATCTCGTTGCCGGACGATACCCCTATTGGAACCGAAGCCTGGGAGCTGATCACTTCATGCTTGCTTGCCATGATTGGGGGCCAGAGACTTCATTATCTGTTCCAAACATGTACAAGAACTCGATTCGGGTGCTTTGTAATGCCAACACCTCTGAGGGATTCAACCCTTCTAAAGATGTTTCTTTTCCTGAAATCAATCTCCAAACAGGTACTATAATCGGTTTCGTCGGTGGGCCATCTGCATCTAAACGTCCCGTTTTGGCTTTCTTTGCTGGAGGCCTTCATGGTTACATTAGGTCTATTCTTCTTGAGCATTGGGAAAATAAGGATGAAGATATCCAAGTTCATAGGTACCTTCCGAAGGAAGTATCTTACTACGCGATGTTACGAAAGAGCAAGTTCTGCCTTTGCCCAAGCGGGTATGAGGTCGCAAGCCCGAGAGTGGTGGAGGCGATCTACACTGGCTGTGTTCCTGTACTCATTTCAGATCATTATGTTCCTCCGTTCAGCGATGTTTTGAATTGGAAATCGTTCTCGGTCGAGGTTTCTGTGAAGGACATTCCAAACTTGAAGGAAATTCTAACTAGGATTTCGCCAAGGCAGTACATAAGAATGCAGAGAAGAATAGGACAGATTAGGAGACATTTTGAGGTAAATTCACCACCCAAGCGATTTGATGTGTTCCATATGATCCTTCATTCCATATGGCTTAGAAGATTGAACTTCAGAATCATTGATGATCAGTAA 1629 0.4506 MRSDTACCDPNAVPCDCVAARCGRIIVIQNHTIIACDVVAANTATANGTELVNISKPWSNTTSVNETYVSHQRQMQPRKFSILDRMEAGLLQARAAIGQAKVENQTHDPDYVPEGPMYWNAKAFHSMMHGHGSAQAPVRSRGGRHGLTVLLSVILHHKEPLVHGCYHHRIGRVLLPCCCDPEVGTLHFSLILNYHLFTKNFYDRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAMEMNDQFRTRDPEKAHVFFLPFSVVMLVRFVYIRDSHDFGPIRKTVIDYVNLVAGRYPYWNRSLGADHFMLACHDWGPETSLSVPNMYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGTIIGFVGGPSASKRPVLAFFAGGLHGYIRSILLEHWENKDEDIQVHRYLPKEVSYYAMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVKDIPNLKEILTRISPRQYIRMQRRIGQIRRHFEVNSPPKRFDVFHMILHSIWLRRLNFRIIDDQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0944 542 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 226 502 - -
Lal24g0944 542 Pfam Exostosin family 210 490 IPR040911 -
Lal24g0944 542 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 37 125 IPR004263 GO:0006486|GO:0016757
Lal24g0944 542 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 201 539 IPR004263 GO:0006486|GO:0016757
Lal24g0944 542 PANTHER EXOSTOSIN FAMILY PROTEIN 201 539 - -
Lal24g0944 542 PANTHER EXOSTOSIN FAMILY PROTEIN 37 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0944 Lal-Chr24 7888998 7892176 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0944 - - gmx:100806278 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0944 24 7888998 7892176 Lal24g0944 24 7888998 7892176 ECH
Lal1g1786 1 20218399 20221675 Lal24g0944 24 7888998 7892176 PCT
Lal24g0944 24 7888998 7892176 Lal1g1786 1 20218399 20221675 PCT