Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1786 ATGAGAGTTTCTGATTCATCTTCATCAATGAATCTCTTCTTATTCATGCTCCCATTCATCTTAATTGGTGTGTTTATTTCTTTGTTGGGTCCTAATGATTCAACTTGGTCTTTTATTTCTGTTACTTCTCCTTCTTCTGCCTTACCAGATGGTGGTTTTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGTTTCTTCAATATCTGATTTGAAACAAGGTGGAGAAGGGTTTGTGATGGTGGCTGTGGATCCTCATGCTAAGGAGGAGAATGCTATTTCTGATGACACTTCTTTCAATAACTACTCTGCTCCTTCATTTCCCATTCAGGCCATTCAAGCACTTCAACTATATAATCAAAGTGAAGAAAATAGCAATGTCTCCAGAATTTTGCCCAACAAGGCTCCAATGAATGAATCTTATGTTCCTCAATTGACACTGAGGCAACAAAGAAAATTCAGCATCTTAGATAGAACTGAAGCTACTCTAAGACAAGCTCGAGCTTCGATTAGAGAAGCAAAAAATGGAAATCAATCACAAGATATAGACTATGTCCCATTAGGACCAATGTATCATAATGCTAAAGTGTTTCACAGGAGTTACATAGAAATGGAGAAAGAGTTTAAAGTATTCGTCTACGAAGAAGGGGAGCCACCAGTTTTCCATAATGGACCTTGCAAGAGCATATACTCCATGGAGGGAAATTTCATCCATGCTATTGAGATGAATGAACAATTCCGAACAAGGGACCCCGAGAAAGCGCAAGTATTTTTCCTTCCTTTTAGTGTAGCAATGATGGTCCAATTCGTCTATGTACGTGACTCTCATGACTATGGTCCCTTAAGAAAAACTATCATCGACTATGTCAATGTCATTGGTGAAAGATATCCCTTCTGGAACCGAAGCCTCGGAGCCGATCATTTCATGCTTTCTTGCCATGACTGGAGGGTGAGGGCGAGCCTTAGCACAACGGGGCCAGAGACTTCAGCTTCTGTTCCGAACTTGTACAAGAACTCGATTCGTGTTTTGTGCAATGCTAACACCTCAGAAGGATTCAATCCATCAAAGGATGTATCTTTACCAGAAGTGAATCTCCAAACAGGTACAATAAAAGGTTTCATTGGTGGACCATCTCCATCTAAACGTTCAGTTTTGGCGTTCTTCGCCGGAGGGGTCCATGGCCCTATTAGGCCAATTCTTCTAGAGCATTGGGAAAACAAAGACCAAGACATTCAAGTTTATAAGTACCTTCCAAAGGGTATGTCCTACTATGATATGTTAAGGAAGAGCAAGTTCTGCCTTTGTCCTAGTGGGTATGAGGTAGCAAGTCCTAGAATAGTGGAGGCAATATACACAGGTTGTGTCCCAGTGCTTATTTCAGACCATTATGTGCCTCCATTTAGTGATGTTTTGAATTGGAAATCATTTTCTGTTGAGGTTCCAGTGAAGGACATTCCTAAGTTGAAGGAAATTTTGATGAGTATTTCTCCTAGGCAGTATATAAGAATGCAGAGAAGAGTAGGACAAATTAGGAGACATTTTGAGGTACATAGTCCTCCCAAGAGATTTGATGTGTTTCATATGATCCTTCATTCTGTTTGGCTTAGAAGATTGAACTTCATAGTACACAATGATCAATGA 1644 0.4063 MRVSDSSSSMNLFLFMLPFILIGVFISLLGPNDSTWSFISVTSPSSALPDGGFGGGGGGDGGGGGVSSISDLKQGGEGFVMVAVDPHAKEENAISDDTSFNNYSAPSFPIQAIQALQLYNQSEENSNVSRILPNKAPMNESYVPQLTLRQQRKFSILDRTEATLRQARASIREAKNGNQSQDIDYVPLGPMYHNAKVFHRSYIEMEKEFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNEQFRTRDPEKAQVFFLPFSVAMMVQFVYVRDSHDYGPLRKTIIDYVNVIGERYPFWNRSLGADHFMLSCHDWRVRASLSTTGPETSASVPNLYKNSIRVLCNANTSEGFNPSKDVSLPEVNLQTGTIKGFIGGPSPSKRSVLAFFAGGVHGPIRPILLEHWENKDQDIQVYKYLPKGMSYYDMLRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVPVKDIPKLKEILMSISPRQYIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFIVHNDQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1786 547 PANTHER EXOSTOSIN FAMILY PROTEIN 104 543 - -
Lal1g1786 547 Pfam Exostosin family 206 496 IPR040911 -
Lal1g1786 547 Coils Coil 157 177 - -
Lal1g1786 547 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 104 543 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1786 Lal-Chr1 20218399 20221675 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1786 - - gmx:100806278 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1786 1 20218399 20221675 Lal1g1786 1 20218399 20221675 ECH
Lal1g1786 1 20218399 20221675 Lal24g0944 24 7888998 7892176 PCT
Lal24g0944 24 7888998 7892176 Lal1g1786 1 20218399 20221675 PCT