Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0848 ATGGCGGCGATAACCCGCCACCTCGCAAACCGCACACCTTCAATCTCTTCCTTAGCAAGGAGGTGTCTCTCTTCCACGCTCCCCTCAGAAACCAACAACTGTCACGCGCCACCGTACTCGTCCTTCAACCTCAAACCACGCGTTCCACCACCCGAGGATCTGAAAGATAAACATGTCCAATGGGTGTTCCTTGGCTGCCCTGGCGTCGGAAAAGGAACGTACGCTAGTCGCCTCTCCAATCTCATCGGTGTCCCTCATATCGCTACCGGTGATCTTCTCCGTGAACAGCTTGCCTCCTCTACCTCCCTTTCTTCTCAGTTATCAGAAACTGTAAAGCAAGGTCAGTTGGTTTCAGATGAAGTTATTATAAGTTTATTGTCAAAGAGACTTGCTGGTGGGGAAGCTAAAGGTGAATCAGGATTTATTCTTGATGGTTTTCCTCGAACAGTAAAGCAAGCAGTGAGTATCTCTGCTTTGGAAATATTGGAAGGCGTAACTGAGATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTACTGCTTGAGAAATGCCTCGGTAGGAGAATTTGCAGTCAATGTGGGGGAAATTTTAACATTGCTTCCGTTAACATCAATGCTGAGAATGGGAGCCCGGGAATTATCATGGCTCCACTTCTTCCTCCTGCAGATTGTATGTCGAAGCTCACTACTCGATCAGATGATACTGAAGTAGTGGTCAAAGAAAGACTTCGAATATACAATGAAATGAGTCGTCCTGTGGAGGAATTTTACCGTATTAGAGGAAAGTTATTGGAGTTTGACCTGCCTGGAGGAATCCCAGAATCTTGGCCTAAGTTACTGCAAGCTCTTAATCTTGATGATTATGAGGACAAGCGACCTGCCACAGTGTAA 894 0.4631 MAAITRHLANRTPSISSLARRCLSSTLPSETNNCHAPPYSSFNLKPRVPPPEDLKDKHVQWVFLGCPGVGKGTYASRLSNLIGVPHIATGDLLREQLASSTSLSSQLSETVKQGQLVSDEVIISLLSKRLAGGEAKGESGFILDGFPRTVKQAVSISALEILEGVTEIDLVINLKLREDVLLEKCLGRRICSQCGGNFNIASVNINAENGSPGIIMAPLLPPADCMSKLTTRSDDTEVVVKERLRIYNEMSRPVEEFYRIRGKLLEFDLPGGIPESWPKLLQALNLDDYEDKRPATV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0848 297 TIGRFAM adk: adenylate kinase 60 285 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lal24g0848 297 ProSitePatterns Adenylate kinase signature. 141 152 IPR033690 -
Lal24g0848 297 Hamap Adenylate kinase [adk]. 59 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 PANTHER ADENYLATE KINASE 1 295 - -
Lal24g0848 297 Pfam Adenylate kinase 64 261 - -
Lal24g0848 297 PANTHER NUCLEOTIDE KINASE 1 295 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 PRINTS Adenylate kinase signature 62 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 PRINTS Adenylate kinase signature 90 104 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 PRINTS Adenylate kinase signature 141 157 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 PRINTS Adenylate kinase signature 249 263 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal24g0848 297 Gene3D - 48 288 IPR027417 -
Lal24g0848 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 284 IPR027417 -
Lal24g0848 297 CDD ADK 60 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0848 Lal-Chr24 6864004 6869974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0848 K00939 - gmx:100777619 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0848 24 6864004 6869974 Lal24g0848 24 6864004 6869974 ECH
Lal20g0077 20 510264 513602 Lal24g0848 24 6864004 6869974 PCT
Lal24g0848 24 6864004 6869974 Lal20g0077 20 510264 513602 PCT