Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0077 ATGGCGGCCATAACCCGCCTCATAAACCGCACCACTTGCTCCTCCTCTTCCGTCTCTTATTTCGCGCGTAGATCCTTTTCTCACGCGCCTCAACGCGTAGATCCAAAGGACAGGAACGTTCAGTGGGTTTTCTTAGGTTGTCCCGGCGTCGGAAAAGGCACCTACGCCACCCGCCTCTGTAATCTCCTCCGTGTTCCTCACATCGCCACCGGAGATCTCGTTCGCCATGAACTCTCATCCAAAGGTCCCCTCTCTCAACAGCTATCAGAAATTGTAAATCAAGGGAAATTGGTATCTGATGAAATTATTATAAATTTATTGAAAGCGAGATTGGCTGCTGGTGAAGCTAAAGGCGAGTCAGGATTTATCCTTGATGGTTTTCCTCGAACAATCAACCAAGCGGAAATATTGGAAGGGGTAACTGACATCGACTTGGTAGTCAATCTGAAGCTTGAAGAAGAAATATTGCTTGAGAAATGCCTTGGCAGGAGAATGTGCAGTGAGTGTGGAGGAAACTTTAATGTTGCATCCATTAACATGAAGGGTGAAAATGGGCGCCCTGGGACGGTCATGCCTCCACTTCTTCCTCCCGCACATTGCATGTCAAAGCTCATTACTCGTGCAGATGATACTGAAGCAGTGGTCAAAGAGAGGCTTCGAATTTACAACGAAACGAGTAAGCCTGTGGAGGAATTTTATCGTAGTAGAGGGAAATTATTGGAGTTTGACCTGCCAGGAGGAATCCCAGAATCTTGGCCAAAGTTACTTCATGCTCTTAATCTTGATGATTATGAGGAGAAGCAGTCTGCTGCAGCATAA 819 0.4664 MAAITRLINRTTCSSSSVSYFARRSFSHAPQRVDPKDRNVQWVFLGCPGVGKGTYATRLCNLLRVPHIATGDLVRHELSSKGPLSQQLSEIVNQGKLVSDEIIINLLKARLAAGEAKGESGFILDGFPRTINQAEILEGVTDIDLVVNLKLEEEILLEKCLGRRMCSECGGNFNVASINMKGENGRPGTVMPPLLPPAHCMSKLITRADDTEAVVKERLRIYNETSKPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0077 272 TIGRFAM adk: adenylate kinase 41 259 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lal20g0077 272 Hamap Adenylate kinase [adk]. 40 260 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 PANTHER ADENYLATE KINASE 14 272 - -
Lal20g0077 272 PRINTS Adenylate kinase signature 43 56 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 PRINTS Adenylate kinase signature 71 85 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 PRINTS Adenylate kinase signature 122 138 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 PRINTS Adenylate kinase signature 207 222 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 PRINTS Adenylate kinase signature 224 238 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 259 IPR027417 -
Lal20g0077 272 CDD ADK 41 243 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal20g0077 272 Pfam Adenylate kinase 45 237 - -
Lal20g0077 272 ProSitePatterns Adenylate kinase signature. 122 133 IPR033690 -
Lal20g0077 272 Gene3D - 26 261 IPR027417 -
Lal20g0077 272 PANTHER NUCLEOTIDE KINASE 14 272 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0077 Lal-Chr20 510264 513602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0077 K00939 - gmx:102666238 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0077 20 510264 513602 Lal24g0848 24 6864004 6869974 PCT
Lal24g0848 24 6864004 6869974 Lal20g0077 20 510264 513602 PCT