Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0425 ATGAAGGTGACCCGTGTGGCATTAGTAAATGGATCCTCTCATCACTGTTTCTTTCCTCAACTCCATCGACGACTTCGTTTCGCATCCCTCTCTTCCTCTCTCTCAGATTTGACAAGCTTGAAGACAAAGAAAGAAATGTCGGGTCCTAGGATTGCTCACGCTACATTGAAGGGACCTAGTGTTGTGAAGGAGTTACTTATTGGAATAACACTGGGTTTAGCTGCTGGTGGTGTCTGGAAGATGCATCACTGGAATGAACAGAGAAAGGTCAGGACCTTTTACGATCTACTGGAAAAAGGAAAGGAAAAAATAATAATGGCAACAATAGCTGGTTTGAGCCTTTCAAGTCCAAGGGTACTTGCCAAGGGACCAGACTCATCACCACAAAAGGTACAATTCATTAGGTTTCCTTCATTGTTGAAGCTCAACCAAAGGTCTCTAGCAACTCATGGGTCAGGACGAATGATGAGCCTTAGACCCGTGCATGCAGCACCAGAGAGCATATCGGAGAAGGTGGAGGAGAGTATAAAGAACGCGAAGGAGGCCTGCTCCGATGACCCGGTCAGCGGAGAGTGTGTGGCGGCATGGGATGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCATGCTAGGGACAAGAAGAAGAGCACTGATCCTTTGGATGCATACTGTAAGGACAACCCTGAGACTGATGAATGTCGCACCTATGACAATTGA 714 0.4804 MKVTRVALVNGSSHHCFFPQLHRRLRFASLSSSLSDLTSLKTKKEMSGPRIAHATLKGPSVVKELLIGITLGLAAGGVWKMHHWNEQRKVRTFYDLLEKGKEKIIMATIAGLSLSSPRVLAKGPDSSPQKVQFIRFPSLLKLNQRSLATHGSGRMMSLRPVHAAPESISEKVEESIKNAKEACSDDPVSGECVAAWDEVEELSAAASHARDKKKSTDPLDAYCKDNPETDECRTYDN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0425 237 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 106 237 IPR039314 -
Lal24g0425 237 Pfam CP12 domain 168 236 - -
Lal24g0425 237 SMART CP12_2 168 237 IPR003823 -
Lal24g0425 237 MobiDBLite consensus disorder prediction 204 237 - -
Lal24g0425 237 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 106 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0425 Lal-Chr24 3028333 3035457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0425 - - sind:105163045 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0418 18 3523928 3524284 Lal24g0425 24 3028333 3035457 PCT
Lal24g0425 24 3028333 3035457 Lal18g0418 18 3523928 3524284 PCT